Jatropha Genome Database

JcCA0152721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152721.10 + phase: 0 /partial
         (296 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29673.m000902 s-adenosylmethionine decarboxylase, putative            520   e-148
30138.m003848 s-adenosylmethionine decarboxylase, putative            449   e-127
27772.m000038 s-adenosylmethionine decarboxylase, putative            342   1e-94
29726.m003938 s-adenosylmethionine decarboxylase, putative            237   4e-63

>29673.m000902 s-adenosylmethionine decarboxylase, putative
          Length = 359

 Score =  520 bits (1340), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 251/296 (84%), Positives = 274/296 (92%)

Query: 1   MALPTSAIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKAQIDEILKPAECTIVDSLSN 60
           MAL    IGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSK+Q+DEILKPAECTIVDSLSN
Sbjct: 1   MALSVPPIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKSQLDEILKPAECTIVDSLSN 60

Query: 61  DHVDSYVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIF 120
           DHVDSYVLSESSLF+YPYK++IKTCGTTKLLLSIPAILKLA TLSL+V SVRY+RGSFIF
Sbjct: 61  DHVDSYVLSESSLFVYPYKLMIKTCGTTKLLLSIPAILKLADTLSLSVSSVRYTRGSFIF 120

Query: 121 PGAQSFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSASLDTGRHSSSVQ 180
           P AQ+FPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPD+T+KWH YSA++D   HSS + 
Sbjct: 121 PSAQTFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDETRKWHAYSAAIDERCHSSPIY 180

Query: 181 TLEMCMTGLDRDRASVFYKTPASSAAGMTEESGIRKILPQSEICDFDFEPCGYSMNSIEG 240
           TLEMCMTGLDR+RASVFYKT  SSAA MTE+SGIRKILPQSEICDFDF+PCGYSMN++EG
Sbjct: 181 TLEMCMTGLDRERASVFYKTHTSSAAVMTEDSGIRKILPQSEICDFDFDPCGYSMNAVEG 240

Query: 241 GAISTIHVTPEDGFSYASFEAVGYNLEQVKLTLLLERVLACFEPAEFSIALHSDFV 296
            AISTIH+TPEDGFSYASFE++GYN E+V LT LLERVLACFEP EFSIALHS+ V
Sbjct: 241 DAISTIHITPEDGFSYASFESMGYNFEEVNLTQLLERVLACFEPTEFSIALHSNIV 296


>30138.m003848 s-adenosylmethionine decarboxylase, putative
          Length = 361

 Score =  449 bits (1154), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/294 (73%), Positives = 250/294 (85%)

Query: 1   MALPTSAIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKAQIDEILKPAECTIVDSLSN 60
           M +  SAIGFEGYEKRLE+SF E G F DP G GLRSLSKAQ+D IL PAECTIVDSLSN
Sbjct: 4   MEMAVSAIGFEGYEKRLEISFFELGMFVDPEGKGLRSLSKAQLDMILGPAECTIVDSLSN 63

Query: 61  DHVDSYVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIF 120
           ++VDSYVLSESSLF+YPYK+IIKTCGTTKLLL+IP ILKLA  LSL V SVRY+RGSFIF
Sbjct: 64  ENVDSYVLSESSLFVYPYKIIIKTCGTTKLLLAIPPILKLADALSLNVKSVRYTRGSFIF 123

Query: 121 PGAQSFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSASLDTGRHSSSVQ 180
           PGAQS+PHRSFSEEVAVLD +FGKLG  S AYVMG     QKWHVYSAS  +      V 
Sbjct: 124 PGAQSYPHRSFSEEVAVLDDYFGKLGAGSTAYVMGGLHSPQKWHVYSASAHSTYCCDCVY 183

Query: 181 TLEMCMTGLDRDRASVFYKTPASSAAGMTEESGIRKILPQSEICDFDFEPCGYSMNSIEG 240
           T+EMCMTGL+R++ASVF+K+ ++SAA MT +SGIR+ILP S+ICDFDF+PCGYSMN+IEG
Sbjct: 184 TIEMCMTGLEREKASVFFKSQSASAAVMTVDSGIRRILPNSKICDFDFDPCGYSMNAIEG 243

Query: 241 GAISTIHVTPEDGFSYASFEAVGYNLEQVKLTLLLERVLACFEPAEFSIALHSD 294
            AISTIH+TPEDGFSYASFE VGYN E+V L  L+ERVLACF+P++FSIA+H++
Sbjct: 244 AAISTIHITPEDGFSYASFETVGYNPEEVNLNQLVERVLACFQPSQFSIAVHAN 297


>27772.m000038 s-adenosylmethionine decarboxylase, putative
          Length = 301

 Score =  342 bits (877), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 168/292 (57%), Positives = 219/292 (75%), Gaps = 13/292 (4%)

Query: 4   PTSAIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKAQIDEILKPAECTIVDSLSNDHV 63
           P S IGFEG+EKRLE++F EP  F DP G GLR+LS++Q+D IL+PA CTIV  LSN+  
Sbjct: 7   PPSPIGFEGFEKRLEIAFQEPPIFKDPTGRGLRALSRSQLDSILEPACCTIVSQLSNNQF 66

Query: 64  DSYVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIFPGA 123
           DSYVLSESSLF+YP+K+++KTCGTTKLLLSI  IL LA +LS+ V  V+YSRG+FIFP  
Sbjct: 67  DSYVLSESSLFVYPFKIVLKTCGTTKLLLSIKPILSLADSLSVAVTHVQYSRGTFIFPNY 126

Query: 124 QSFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSAS----LDTGRHSSSV 179
           Q  PHRSFSEEV  L+  F  L    +AYV+G       WH+YSAS    L  G + + +
Sbjct: 127 QPAPHRSFSEEVTTLNEFFSHLN--PLAYVIGD------WHIYSASQSEPLMRG-NRTDM 177

Query: 180 QTLEMCMTGLDRDRASVFYKTPASSAAGMTEESGIRKILPQSEICDFDFEPCGYSMNSIE 239
            T+E+CMTGL++ +A+VF+K+  ++A+ MT+ SGIR I+P   ICDFDF+PCGYSMN I+
Sbjct: 178 ATVEICMTGLEKKKAAVFFKSSGNTASEMTKISGIRDIIPSHVICDFDFDPCGYSMNGID 237

Query: 240 GGAISTIHVTPEDGFSYASFEAVGYNLEQVKLTLLLERVLACFEPAEFSIAL 291
           G   ST+HVTPEDGFSYAS+EA+G +  ++KL  L++RVL CF P +FS+A+
Sbjct: 238 GSGYSTVHVTPEDGFSYASYEALGLDYGEIKLNPLIKRVLKCFGPKQFSVAV 289


>29726.m003938 s-adenosylmethionine decarboxylase, putative
          Length = 342

 Score =  237 bits (605), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 134/295 (45%), Positives = 178/295 (60%), Gaps = 17/295 (5%)

Query: 9   GFEGYEKRLEVSFSEPGFFADP---GGMGLRSLSKAQIDEILKPAECTIVDSLSNDHVDS 65
           GFEG+EKRLE+ F    F  DP     MGLR L    +  +L   +CT+V ++ N + D+
Sbjct: 5   GFEGFEKRLELHF----FGDDPVMVDNMGLRLLEFESLVNVLNAVQCTVVSAVGNQYFDA 60

Query: 66  YVLSESSLFIYPYKVIIKTCGTTKLLLSIPAILKLAGTLSLTVHSVRYSRGSFIFPGAQS 125
           YVLSESSLF+YP K+IIKTCGTT+LL SI  +L  A  L L++ S RY+RG+FIFP +Q 
Sbjct: 61  YVLSESSLFVYPTKIIIKTCGTTQLLKSIRPLLHYACNLGLSLCSCRYTRGNFIFPKSQP 120

Query: 126 FPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDKTQKWHVYSASLDTG--RHSSSVQTLE 183
           FPH SF EEV  L+           A VM S   +  WHV++AS        +  + T+E
Sbjct: 121 FPHTSFKEEVIYLEETLPSNLCYRKASVMPSKMTSHSWHVFTASDQNHFISQNHHLYTIE 180

Query: 184 MCMTGLDRDRASVFYKTPASSAAG------MTEESGIRKILPQSEICDFDFEPCGYSMNS 237
           +CMT LDR  A  F++       G      MT+ +GI  I P + ICDF F+PCGYSMN 
Sbjct: 181 VCMTELDRVLARKFFQPAGDGKNGDVAGKEMTKLTGIGDINPGAIICDFAFDPCGYSMNG 240

Query: 238 IEGGAISTIHVTPEDGFSYASFEAVG--YNLEQVKLTLLLERVLACFEPAEFSIA 290
           I+    STIHVTPEDG+SYASFE VG  ++     +  +L++V+  F PA  S++
Sbjct: 241 IDSDRYSTIHVTPEDGYSYASFECVGSIFDDSDDDVAEVLKKVVQVFRPATMSVS 295