Jatropha Genome Database

JcCA0152521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152521.10 - phase: 0 
         (212 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29776.m000478 ribose-5-phosphate isomerase, putative                  340   3e-94
29932.m000590 ribose-5-phosphate isomerase, putative                   80   7e-16
30128.m008607 ribose-5-phosphate isomerase, putative                   76   1e-14

>29776.m000478 ribose-5-phosphate isomerase, putative
          Length = 262

 Score =  340 bits (871), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 166/209 (79%), Positives = 184/209 (88%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           MVIGLGSG+ASGMAIQYLGRQLR G LKDIVGIPMS+          I LD+YQDGSQID
Sbjct: 1   MVIGLGSGHASGMAIQYLGRQLRIGVLKDIVGIPMSIASASEAAKAGIRLDRYQDGSQID 60

Query: 61  FAFDDADLIEEETLIAVIGRRKSQVEESIIQEKSILNAANKHVFIIPEKQYKGVIDGSIP 120
           FAFDDAD++EE+TLIAV+GR+K Q EES IQEKSILNAA++HVF+I EKQYK  +DGSIP
Sbjct: 61  FAFDDADVLEEDTLIAVVGRQKMQGEESFIQEKSILNAASRHVFMISEKQYKSRLDGSIP 120

Query: 121 VLVQSLNWMEAAEEIDDLFLGDAEVWRRPSIGDAGPLGGDFPLVTREGHNVLDVIFTSPI 180
           VL+Q L+WME AE+IDDLFLGDAE+WRRPSIG AGPLGGDFPLVTREGHNVLDVIFTSPI
Sbjct: 121 VLIQPLSWMETAEQIDDLFLGDAEIWRRPSIGQAGPLGGDFPLVTREGHNVLDVIFTSPI 180

Query: 181 QSLAEVAKSLDKVAGVVDHGIISKFPLVS 209
           QSLAEVA+SLDKV GVVDHGIISKFP  +
Sbjct: 181 QSLAEVAESLDKVDGVVDHGIISKFPCTA 209


>29932.m000590 ribose-5-phosphate isomerase, putative
          Length = 264

 Score = 80.1 bits (196), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 13/204 (6%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           MV+GLG+G+ +  A+  +   L  G L +IVGIP S           IPL        +D
Sbjct: 48  MVLGLGTGSTAKHAVDRIADLLHQGKLTNIVGIPTSKKTQKQALSLGIPLSDLDSHPVVD 107

Query: 61  FAFDDADLIEEETLIAVIGRRKSQVEESIIQEKSILNAANKHVFIIPEKQ---YKGVIDG 117
            A D AD ++   L  V GR       S+++EK I +A  K + I+ E +   + G   G
Sbjct: 108 LAIDGADEVDSH-LNLVKGRGG-----SLLREKMIESACKKFIVIVDETKLVPHIGANGG 161

Query: 118 SIPVLVQSLNWMEAAEEIDDLFLGDAEVWRRPSIGDAGPLGGDFPLVTREGHNVLDVIFT 177
           ++PV V    W    E++  LF     V +  +  D G  G + P VT  G+ ++D+ F 
Sbjct: 162 AMPVEVVPFCWKFTQEKLQSLFDYAGCVAKLRT--DNG--GKEEPFVTDNGNYIVDLFFK 217

Query: 178 SPIQSLAEVAKSLDKVAGVVDHGI 201
             I  L   +  + ++AGVV+HG+
Sbjct: 218 KEIGDLEVASDKILRLAGVVEHGM 241


>30128.m008607 ribose-5-phosphate isomerase, putative
          Length = 284

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 15/204 (7%)

Query: 1   MVIGLGSGNASGMAIQYLGRQLRTGALKDIVGIPMSVXXXXXXXXXXIPLDQYQDGSQID 60
           M++GLG+G+ +   +  +G  L++G LKDI+GIP S           IPL    +  ++D
Sbjct: 72  MILGLGTGSTAAFVVAKIGELLKSGELKDIIGIPTSKRTEEQALSLGIPLSVLDEHPKLD 131

Query: 61  FAFDDADLIEEETLIAVIGRRKSQVEESIIQEKSILNAANKHVFIIPEKQYKGVIDGS-- 118
            A D AD ++ + L  V GR       ++++EK +  A++K V +  E +    + GS  
Sbjct: 132 LAIDGADEVDPD-LNLVKGRGG-----ALLREKMVEAASDKFVVVADETKLVDGLGGSKL 185

Query: 119 -IPVLVQSLNWMEAAEEIDDLFLGDAEVWRRPSIGDAGPLGGDFPLVTREGHNVLDVIFT 177
            +PV V    W      + +LF  D  V  +  + + G      P VT   + ++D+ F 
Sbjct: 186 AMPVEVVQFCWKYNLIRLKELF-KDEGVDAKLRLNEDGK-----PYVTDNSNYIVDLYFE 239

Query: 178 SPIQSLAEVAKSLDKVAGVVDHGI 201
           +PI+      K +  + GVV+HG+
Sbjct: 240 NPIKDGYAAGKEISSLEGVVEHGL 263