Jatropha Genome Database

JcCA0152151.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152151.30 - phase: 0 
         (272 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29711.m000331 ER lumen protein retaining receptor, putative           484   e-137
30170.m014183 ER lumen protein retaining receptor, putative           348   2e-96
30120.m000373 ER lumen protein retaining receptor, putative           300   7e-82
29904.m002932 er lumen protein retaining receptor, putative           113   9e-26
30073.m002241 er lumen protein retaining receptor, putative           105   2e-23
30026.m001475 er lumen protein retaining receptor, putative           101   3e-22

>29711.m000331 ER lumen protein retaining receptor, putative
          Length = 272

 Score =  484 bits (1247), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 236/272 (86%), Positives = 240/272 (88%)

Query: 1   MRPQRRPIHVVTTWVRRQPPKVKAFXXXXXXXXXXXXXRFIVHDHDNLFVAAEAVHSIGI 60
           MR  +RPIH V+TWVRRQPPKVKAF             RFIVHDHDNLFVAAEAVHSIGI
Sbjct: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVAGMAALVFLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYM 120
            VLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIH            WVIYM
Sbjct: 61  IVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDLATLGTTLWVIYM 120

Query: 121 IRFKLKSSYMEDKDNFAIYYVVVPCAILALFIHPSTSHNLINRILWAFCVYLEAVSVLPQ 180
           IRF LKSSYMEDKDNFAIYYVVVPCAILAL IHPSTSHN++NRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFNLKSSYMEDKDNFAIYYVVVPCAILALLIHPSTSHNIVNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
           IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272


>30170.m014183 ER lumen protein retaining receptor, putative
          Length = 221

 Score =  348 bits (893), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 163/217 (75%), Positives = 179/217 (82%)

Query: 1   MRPQRRPIHVVTTWVRRQPPKVKAFXXXXXXXXXXXXXRFIVHDHDNLFVAAEAVHSIGI 60
           M+  +RPIH V TWVRRQPPK KA              R +VHDHDNLFVAAEAVH++GI
Sbjct: 1   MKGTKRPIHAVATWVRRQPPKAKAILAVVSGMAALVFLRMVVHDHDNLFVAAEAVHAVGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYM 120
           SVLIYKLMKEKTCAGLSLKSQELTA+FLA RLYCSFVMEYDIH            WVIY 
Sbjct: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAARLYCSFVMEYDIHTLLDSATLLTTLWVIYT 120

Query: 121 IRFKLKSSYMEDKDNFAIYYVVVPCAILALFIHPSTSHNLINRILWAFCVYLEAVSVLPQ 180
           IRFKL+SSYM+DKDNFAIYYV++PCA+L+L IHP+T H++ NRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLRSSYMDDKDNFAIYYVLIPCAVLSLIIHPTTQHHIFNRICWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVL 217
           LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQV+
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVI 217


>30120.m000373 ER lumen protein retaining receptor, putative
          Length = 255

 Score =  300 bits (767), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 148/268 (55%), Positives = 185/268 (69%), Gaps = 17/268 (6%)

Query: 2   RPQRRPIHVVTTWVRRQPPKVKAFXXXXXXXXXXXXXRFIVHDHDNLFVAAEAVHSIGIS 61
           R +    + +  W+RRQ  KVK               +F++ DH++ FVA+EA+H+    
Sbjct: 3   RKRSSAANGMFGWMRRQSVKVKTLLGVIVALGCLVGLKFMIKDHNHFFVASEAIHA---- 58

Query: 62  VLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMI 121
                       AGLSLKSQELTA+FLAVRL CS VME DIH            WVIYMI
Sbjct: 59  ------------AGLSLKSQELTALFLAVRLACSIVMEADIHTVLDLATLVSTIWVIYMI 106

Query: 122 RFKLKSSYMEDKDNFAIYYVVVPCAILALFIHPSTSHNLINRILWAFCVYLEAVSVLPQL 181
           RFKLKS+Y+++ DN  +YY+VVP AILA  IHP  +H  I+RILWAFCVYLE+VSVLPQL
Sbjct: 107 RFKLKSTYIKELDNMPLYYMVVPSAILAALIHPYKTHICISRILWAFCVYLESVSVLPQL 166

Query: 182 RVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYG-LWPSMVLISE 240
           R+MQN K++EPFT+HYVFALGVARFL+CAHW++QV +TRG  L  +G G  W  M L++E
Sbjct: 167 RLMQNAKMIEPFTSHYVFALGVARFLACAHWIIQVYETRGRYLFLVGSGYFWFPMALLAE 226

Query: 241 IVQTFILADFCYYYVKSVFGGQLVLRLP 268
            VQTFILADFCYYY+KS  GGQL++R+P
Sbjct: 227 AVQTFILADFCYYYIKSFMGGQLLMRMP 254


>29904.m002932 er lumen protein retaining receptor, putative
          Length = 206

 Score =  113 bits (283), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 18/219 (8%)

Query: 55  VHSIGISVLIYKLMKEKTCAGLSLKSQELTAMFLAVR---LYCSFVMEYDIHXXXXXXXX 111
            H   + VL+ K+   K+CAG+SLK+QEL  +  A R   ++ SF+  Y+          
Sbjct: 2   THLASVLVLLLKIHTIKSCAGVSLKTQELYTLVFATRYLDIFTSFISFYNTMMKLIFLGS 61

Query: 112 XXXXWVIYMIRFKL-KSSYMEDKDNFAIYYVVVPCAILALFIHPSTSHNLINRILWAFCV 170
                V Y+ R KL + SY +++D F  +++V PC I AL IH   +      ++W F +
Sbjct: 62  SLSI-VWYIRRHKLVRRSYDKEQDTFHHFFLVAPCLIFALLIHERFT---FKEVMWTFSL 117

Query: 171 YLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYG 230
           YLEAV++LPQL ++Q T+ ++  T  YVF LG  R L   +WV +   T  H      Y 
Sbjct: 118 YLEAVAILPQLVLLQRTRNIDNLTGQYVFLLGAYRALYILNWVYRYF-TEPH------YV 170

Query: 231 LWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPS 269
            W  +  IS +VQT + ADF YYY +S +   + L LP+
Sbjct: 171 HW--ITWISGLVQTLLYADFFYYYFQS-WKNNVKLHLPA 206


>30073.m002241 er lumen protein retaining receptor, putative
          Length = 215

 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 123/227 (54%), Gaps = 17/227 (7%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHXX 105
           NLF  A +  H + + VL+ K+ K K+CAG+SLK+QEL A+    R    F   Y ++  
Sbjct: 2   NLFRFAGDMTHLLSVVVLLLKIRKMKSCAGISLKTQELYAIVFITRYLDLFTKYYSLYNS 61

Query: 106 XXXXXXX-XXXWVIYMIRFK--LKSSYMEDKDNFAIYYVVVPCAILALFIHPSTSHNLIN 162
                       +++ +R+   +K +Y + +D F  Y +++   +LAL +H S     + 
Sbjct: 62  IMKLVFIGTSVGIVWYMRYHKVVKQTYSKTEDTFRHYVLILASFVLALLVHRSLG---VI 118

Query: 163 RILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGH 222
            +LWAF +YLEAV++LPQL ++Q ++ ++  T +YVF LG  R L   +WV +     G 
Sbjct: 119 EVLWAFSIYLEAVAILPQLLLLQRSRNIDNLTVNYVFLLGAYRALYVFNWVYRFF-VEG- 176

Query: 223 LLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPS 269
             V + +  W     IS +VQT + ADF YYY+KS +     L+LP 
Sbjct: 177 --VKVRWIPW-----ISGLVQTALYADFFYYYIKS-WRNHEQLKLPE 215


>30026.m001475 er lumen protein retaining receptor, putative
          Length = 215

 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 18/203 (8%)

Query: 71  KTCAGLSLKSQELTAMFLAVR---LYCSFVMEYD-IHXXXXXXXXXXXXWVIYMIRFKLK 126
           K+C+G+SLK+QEL A+    R   L+  F+  Y+ +             W +   R  +K
Sbjct: 27  KSCSGISLKTQELYALVFLTRYLDLFTDFISLYNYVMKVVFIASSLAIVWCMRRHR-VVK 85

Query: 127 SSYMEDKDNFAIYYVVVPCAILALFIHPSTSHNLINRILWAFCVYLEAVSVLPQLRVMQN 186
            SY ++ D F  Y++V  C +LALF+H   +      I WAF +YLEAV++LPQL ++Q 
Sbjct: 86  RSYDKELDTFRHYFLVAACFVLALFVHEKFT---FREIFWAFSIYLEAVAILPQLVLLQR 142

Query: 187 TKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISEIVQTFI 246
           +  V+  T  YVF LG  R L   +W+ +   T  H      +  W S   IS +VQT +
Sbjct: 143 SGNVDNLTGQYVFFLGAYRALYILNWIYRYF-TETH------FSRWISC--ISGLVQTAL 193

Query: 247 LADFCYYYVKSVFGGQLVLRLPS 269
            ADF YYY  S +     L+LP+
Sbjct: 194 YADFFYYYFIS-WKNNAKLQLPA 215