Jatropha Genome Database

JcCA0152151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152151.10 + phase: 0 
         (97 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29711.m000333 mta/sah nucleosidase, putative                          165   4e-42

>29711.m000333 mta/sah nucleosidase, putative
          Length = 266

 Score =  165 bits (418), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 82/96 (85%), Positives = 89/96 (92%)

Query: 2   VGKLSTGDSLDMSPQDEATITANDAVVKDMEGAAVAYVADLLKVPTIFVKAVTDVVDGDK 61
           VGKLSTGDSLDMS QDEA+I ANDAVVKDMEGAAVA+VADL KVP IFVKAVTD+VDGDK
Sbjct: 171 VGKLSTGDSLDMSAQDEASIIANDAVVKDMEGAAVAFVADLFKVPAIFVKAVTDIVDGDK 230

Query: 62  PTAEEFLQNLAAVTAALEQAVTQAIDFIKGKCLSEL 97
           PTAEEFLQNLAAVTAAL+QAVTQ +D+I GKC+ EL
Sbjct: 231 PTAEEFLQNLAAVTAALDQAVTQVVDYINGKCVFEL 266