Jatropha Genome Database

JcCA0152031.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152031.10 + phase: 0 /pseudo/partial
         (314 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014228 calcium ion binding protein, putative                   353   4e-98

>30170.m014228 calcium ion binding protein, putative
          Length = 1006

 Score =  353 bits (907), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 184/255 (72%), Positives = 200/255 (78%), Gaps = 8/255 (3%)

Query: 1   MERGGSADGILQVRADRIQSDLDELMKGFKLNVARDMGXRXXXXXXXXXPIGWQPGIQEG 60
           +E+GGSADGILQVRADRIQSDLDEL++   +   +  G           P GWQPGIQEG
Sbjct: 663 IEQGGSADGILQVRADRIQSDLDELLRVL-IERCKKHGLEFKSTAMIELPFGWQPGIQEG 721

Query: 61  AAVWDEEWDKFEDEGFANDLMLDMKNVSAPNSKSTIQ------DGSPTHDSLSNGDDKSG 114
           AAVWDEEWDKFEDEGFANDL +D+KNVSA NSKST+Q      DGS T DSLSNG   + 
Sbjct: 722 AAVWDEEWDKFEDEGFANDLTIDVKNVSASNSKSTVQKEKGSQDGSLTPDSLSNGGGNA- 780

Query: 115 NFSRVDGHGIEGESVYSHSEDELARSPQSSLAGRNALGSPSKAFSDVFAKSTDADAETHR 174
           NF     H +E ES Y HSEDELARSPQ S  GR AL SPS+AFSDVFAKSTDADAETHR
Sbjct: 781 NFFSTSEHALESESAYGHSEDELARSPQGSSTGRTALESPSQAFSDVFAKSTDADAETHR 840

Query: 175 SFDESTWGAFDTHDDTDSVWGFNPASTKDSDSDKHRDFFGIDDFGIKPIRTGSLSSESIF 234
           SFDESTWGAFDTHD+TDSVWGFNPASTK+SDSDKHRD FG DDFG+KPIRTGS   +S F
Sbjct: 841 SFDESTWGAFDTHDETDSVWGFNPASTKESDSDKHRDIFGTDDFGVKPIRTGSPPLDSFF 900

Query: 235 QKKSPFFEDSVAGSP 249
            KKSPFFEDSVAGSP
Sbjct: 901 HKKSPFFEDSVAGSP 915