Jatropha Genome Database

JcCA0151971.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151971.20 + phase: 0 
         (583 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011227 hypothetical protein                                    647   0.0  

>30190.m011227 hypothetical protein
          Length = 584

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/584 (59%), Positives = 428/584 (73%), Gaps = 7/584 (1%)

Query: 1   MGDELKFQQRWEYRRRHSDFDSSSNDSKYSLGGEPACKKHKLALVPIDNGETSEVSRFGK 60
           MG+ELKFQQRW++RR  SDFDSSS DSK SLGGEPA KKH+LAL+P++N E    +RF +
Sbjct: 1   MGEELKFQQRWDFRRGDSDFDSSSYDSKSSLGGEPAHKKHRLALIPVNNDEIDATTRFQQ 60

Query: 61  KGKNDPGVSGKNEHGTARKGKRGQNKKENLS-TKRGSRSRKEISRK-GKT-NNASENAAL 117
           KG NDPG+SG+   G A +GKRG++K  NL+  K+  R+RK  +RK GKT  +  E+AAL
Sbjct: 61  KGDNDPGISGQIVPGKAEEGKRGRSKNVNLAPNKKKRRTRKGAARKKGKTKTSVDEHAAL 120

Query: 118 NDLKSYMHSLLEELKVTRKNLLSWMREEMQKLVAEEKDSESERKEVIFEGEKVQSQYQNN 177
           +DLK+YM+SLLEELKVTRKNL+SWM+EEM KLV EEK SESERKE  F GE+ Q +YQNN
Sbjct: 121 DDLKNYMNSLLEELKVTRKNLVSWMKEEMAKLVEEEKASESERKEGSFRGEENQLKYQNN 180

Query: 178 SEENAEVQYQNLFGKNIQVQPQNKLAEYGQAHNQSKFKENVHMQYLINLEENIGV-PQKN 236
           SEENA VQYQNLFGKNIQVQ QN   +Y Q H+QSKF++NV  Q +INLEENI + PQKN
Sbjct: 181 SEENARVQYQNLFGKNIQVQHQNNFEDYSQLHHQSKFEKNVQTQQIINLEENIELQPQKN 240

Query: 237 SQENVQLQNRNKVRSSTRARTCNGRPPKRCXXXXXXVDSDTYSPILEDQIDYSRAIVLVE 296
            +E VQ+Q  NK+R+ T  R+CNG P +R        DS+  +P+LEDQ DYSRAIVL+ 
Sbjct: 241 CKEKVQVQRHNKIRTGTGGRSCNGGPSQRYSRNKKLADSNN-TPVLEDQADYSRAIVLLT 299

Query: 297 PTEENGKERLALADKSNSKSSVTDQNMQ--QQKSIVLAIRAQNXXXXXXXXXXXXXXTAN 354
           PTE NG++RLAL DKS SK   +D N+Q  QQKSIVL IRAQN               A 
Sbjct: 300 PTEGNGEDRLALPDKSISKFGPSDSNLQAQQQKSIVLGIRAQNCNGGSPVKSAKGKRAAK 359

Query: 355 SSNHFQLPDYQVNYSRTIGSITSAEKDKGERSGLSLEPTFTCDSFSQAASSMYLTLPSVL 414
           S++H Q+P+ QV++S+ IG I    KDKGERS L +EP F+ +SF+Q ASSMYLTLP+VL
Sbjct: 360 SNDHCQVPNDQVDFSQGIGFIAPTGKDKGERSRLYMEPNFSSNSFNQTASSMYLTLPTVL 419

Query: 415 TKTHFPIHRPDTSSFSYLQQRTAQNQPAISSERSNMMFGSSSHLGYFQGMQPAEERSRNY 474
              H   HRPDTSS +Y Q R  QNQ  I++E+S+ + GSSS+LGY+Q M   E+RSRNY
Sbjct: 420 ANPHIQNHRPDTSSINYFQPRIPQNQAGINAEKSDPILGSSSYLGYYQSMLQPEDRSRNY 479

Query: 475 AKLSSRDISFFNQNSTTTSILGDGFTVPLQTVSGGFSMPNQFDMENLPREXXXXXXXXXX 534
           +++S  DIS FNQN TTTS +G G TVPLQ VSGGF++PNQFD+E+LPR+          
Sbjct: 480 SQMSYSDISSFNQNGTTTSFVGHGVTVPLQAVSGGFNIPNQFDLESLPRKNSNTLGLSMN 539

Query: 535 XXAIRFSGGGYSLPEPYIANNFHGLPNYRVDGRLMTFEDGYRFP 578
             AIRFSG GYSLPEPYIANNFH   NYR DGRLMT++D +R P
Sbjct: 540 GGAIRFSGEGYSLPEPYIANNFHSHSNYRADGRLMTYQDSFRQP 583