Jatropha Genome Database

JcCA0151951.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151951.20 - phase: 0 
         (260 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m004046 exonuclease, putative                                   353   6e-98
30138.m004045 exonuclease, putative                                   276   9e-75

>30138.m004046 exonuclease, putative
          Length = 501

 Score =  353 bits (905), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 173/260 (66%), Positives = 203/260 (78%), Gaps = 8/260 (3%)

Query: 1   MMTSFASDTAQMDPFDMRTLSSEMDINSLQQDVCMEENPLTESSEIPLIETSEIPPVTTE 60
           ++TS  S+T Q DPFDM TLS+EM  +SLQQDV MEE  LTESSE+P         + T 
Sbjct: 250 LLTSVGSNTTQTDPFDMGTLSNEMTTSSLQQDVTMEEKSLTESSEMP--------SLVTV 301

Query: 61  PEGSSGYVEFLKPDDVSISSIRAKFVPFFRGSQKMLLLHKNFILQLNCPHLRVRFGLSTK 120
            +G S Y  FL+ + VSISSIRA FVP FRG+Q+M+LLH++ ILQL CP LRVRFGLSTK
Sbjct: 302 RDGGSAYAGFLETEKVSISSIRASFVPLFRGAQRMVLLHEDVILQLCCPRLRVRFGLSTK 361

Query: 121 FSDHAGRPRLSFVVDASPSLCGVLDACDNIAQQSYGESGSSSDWRPVVNRKPGYLNYPTA 180
           F D AGRPRLSFVVDA P+LC +LD CD  AQ+   ESGS+SDWR VV+RKPG++NYP  
Sbjct: 362 FVDSAGRPRLSFVVDAPPNLCSILDTCDGSAQKLSVESGSTSDWRQVVSRKPGFVNYPIV 421

Query: 181 RMHIPTIVNGEVAQYATEIYQKDPSGTTQKLVFSRFDAAELDTWFSPGTHIDAYFSLDTY 240
           R+HIPT VNG+VAQYATEIYQ+D SG  +KLVFS+F+AAEL+TWF  GT +DAYFSL  Y
Sbjct: 422 RLHIPTAVNGDVAQYATEIYQRDSSGAMEKLVFSKFEAAELETWFISGTFLDAYFSLHPY 481

Query: 241 DYQQSAGIRLVAKKLFICKE 260
           DYQQSAGIRLVAKKL I KE
Sbjct: 482 DYQQSAGIRLVAKKLIIDKE 501


>30138.m004045 exonuclease, putative
          Length = 448

 Score =  276 bits (705), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 150/260 (57%), Positives = 182/260 (70%), Gaps = 14/260 (5%)

Query: 1   MMTSFASDTAQMDPFDMRTLSSEMDINSLQQDVCMEENPLTESSEIPLIETSEIPPVTTE 60
           ++T+  S T Q  PF   TL +EM+I+SLQQD  +E          P  E+SEIP   T 
Sbjct: 197 VVTNVGSTTFQPAPFSRGTLGNEMNIDSLQQDAAIE----------PKKESSEIPSSLTV 246

Query: 61  PEGSSGYVEFLKPDDVSISSIRAKFVPFFRGSQKMLLLHKNFILQLNCPHLRVRF-GLST 119
           PEG SG+  FL+PD+VS+S IRA F P   G Q+M+LL+K+  LQL+C HLRVR+ GLST
Sbjct: 247 PEGGSGHGGFLEPDEVSVSFIRASFCPHSWGVQRMVLLYKDVPLQLHCSHLRVRYNGLST 306

Query: 120 KFSDHAGRPRLSFVVDASPSLCGVLDACDNIAQQSYGESGSSSDWRPVVNRKPGYLNYPT 179
           KF+D+AGRPRLSFVVDA P+L  +LDACD IAQ+   ESGSSS W+ VV  K  + N PT
Sbjct: 307 KFADYAGRPRLSFVVDAPPNLYSILDACDKIAQKVSAESGSSSKWKHVVT-KHDFDNSPT 365

Query: 180 ARMHIPTIVNGEVAQYATEIYQKDPSGTTQKLVFSRFDAAELDTWFSPGTHIDAYFSLDT 239
            R+HIPT V G+VAQYATEI+ KD S T +K  FSR  AAEL+TWF  GT + AYFSLD 
Sbjct: 366 VRLHIPTEVTGDVAQYATEIFHKDSSETMKKHEFSRLGAAELNTWFRQGTFVAAYFSLDP 425

Query: 240 YDYQQ--SAGIRLVAKKLFI 257
           YDY Q   AGIRLVAKKL +
Sbjct: 426 YDYLQEKKAGIRLVAKKLIM 445