Jatropha Genome Database

JcCA0151751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151751.20 - phase: 0 
         (232 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007275 conserved hypothetical protein                          319   8e-88
30009.m000824 conserved hypothetical protein                          270   4e-73
30131.m007008 conserved hypothetical protein                          158   2e-39

>30131.m007275 conserved hypothetical protein
          Length = 419

 Score =  319 bits (817), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 160/233 (68%), Positives = 178/233 (76%), Gaps = 5/233 (2%)

Query: 5   FLDAAGYLNFSIQHVLPRFPPDIRKDLPLDLGEGVLRALCLQALGQGVDLQLGMAIDSVK 64
           FL AAGYL+FSIQHVLPRFPP++RKDLPLDL EGVLRALCLQALGQGVD+QLGMAIDSVK
Sbjct: 183 FLKAAGYLDFSIQHVLPRFPPELRKDLPLDLAEGVLRALCLQALGQGVDVQLGMAIDSVK 242

Query: 65  ATLAVKRRLACEMVKYWHQAQESIVDLPLANGWGEKHKLFIQWXXXXXXXXXXXXHXXXX 124
           ATLAVKRRLACEMVKYWHQAQE+IVDLPLANGWGEKHKLFIQW            H    
Sbjct: 243 ATLAVKRRLACEMVKYWHQAQENIVDLPLANGWGEKHKLFIQWKYAEAKAVAYYYHGSIL 302

Query: 125 XXXXXXXSTEMXXXXXXXXXMLW-HGSRKACESFHRNPPVSRNPILWGTSKFLSEKIPRD 183
                  S EM          L+   S+K+CESFH  PP+SRNP  WGT+K LSEKIPRD
Sbjct: 303 DEGNAERSKEMAAAAAQQAAELFCKQSKKSCESFHMAPPLSRNPTSWGTTKLLSEKIPRD 362

Query: 184 KSS----NEDQHNHEMILRTAPALPEFALSLEPDEYQLPAVDPSWNGHIQSQD 232
           K S    N  QHN EMIL+TAP LP+FALSL+PDEYQLP VDPSWN ++Q+++
Sbjct: 363 KLSKAQHNAPQHNDEMILQTAPELPDFALSLKPDEYQLPPVDPSWNANLQTRN 415


>30009.m000824 conserved hypothetical protein
          Length = 420

 Score =  270 bits (690), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 130/225 (57%), Positives = 161/225 (71%), Gaps = 4/225 (1%)

Query: 5   FLDAAGYLNFSIQHVLPRFPPDIRKDLPLDLGEGVLRALCLQALGQGVDLQLGMAIDSVK 64
           FL AAGYL+ +++HVLP+FP  +R+DLP+DL EGVLRALCLQALGQ VD+QLGMAIDS K
Sbjct: 184 FLKAAGYLDCAVRHVLPQFPAALRRDLPVDLAEGVLRALCLQALGQVVDIQLGMAIDSAK 243

Query: 65  ATLAVKRRLACEMVKYWHQAQESIVDLPLANGWGEKHKLFIQWXXXXXXXXXXXXHXXXX 124
           ATLAVKRRLACEMVKYW QAQ+++++L L NGWGEKH+LF++W            H    
Sbjct: 244 ATLAVKRRLACEMVKYWQQAQDNLMNLLLTNGWGEKHRLFVKWKYVEAKAAAYYYHGLIL 303

Query: 125 XXXXXXXSTEMXXXXXXXXXMLWHGSRKACESFHRNPPVSRNPILWGTSKFLSEKIPRDK 184
                  S  M           +  SR+ACE+F+   P+SRNP LWGT K+LSEKIP+D 
Sbjct: 304 DEGNTEKSHGMAVAALQAADEYFKESRRACEAFNAASPLSRNPPLWGTVKYLSEKIPKDT 363

Query: 185 SS----NEDQHNHEMILRTAPALPEFALSLEPDEYQLPAVDPSWN 225
           SS    N D ++HE I+ TAP LP+FALSL+PD+YQLP+VD SWN
Sbjct: 364 SSKVRINRDLYSHEKIMETAPTLPDFALSLKPDDYQLPSVDSSWN 408


>30131.m007008 conserved hypothetical protein
          Length = 416

 Score =  158 bits (399), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 123/234 (52%), Gaps = 7/234 (2%)

Query: 5   FLDAAGYLNFSIQHVLPRFPPDIRKDLPLDLGEGVLRALCLQALGQGVDLQLGMAIDSVK 64
            L AAGYL   ++ VL R PPD++K    DL +GVL A+ +QALGQG ++QLG+A++S K
Sbjct: 167 LLKAAGYLELCVREVLVRIPPDMKKRFSKDLQDGVLEAISIQALGQGTEIQLGLAVESQK 226

Query: 65  ATLAVKRRLACEMVKYWHQAQESIVDLPLANGWGEKHKLFIQWXXXXXXXXXXXXHXXXX 124
           ATL+VKRRLACE + Y+ QA   +    + N  G+K  LFI+W            H    
Sbjct: 227 ATLSVKRRLACEQLIYFSQAYHCLSGCDMNNENGKKRLLFIKWKFLESKAAAYYYHGLIL 286

Query: 125 XXXXXXXSTEMXXXXXXXXXMLWHGSRKACESFHRNPPVSRNPILWGTSKFLSEKIPRDK 184
                                L   S+KAC SF    PV+R+P  WG  K L +KIP   
Sbjct: 287 DKGNEPACHISAVCCFLAAEGLLQESKKACLSFCLAAPVTRSPPPWGAMKQLHQKIPEVV 346

Query: 185 SSNEDQHNH----EMILRTAPALPEFALSLEPDEYQLPAVDPSWNG---HIQSQ 231
           +     + +    E  L+  P LP+F LSL PD+Y LP VD +W+     IQSQ
Sbjct: 347 ARKSQMYGYLLEEEKALQALPDLPDFQLSLRPDDYVLPEVDEAWDRERWQIQSQ 400