Jatropha Genome Database

JcCA0151491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151491.10 + phase: 0 /partial
         (133 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28281.m000367 conserved hypothetical protein                          274   9e-75
30008.m000811 conserved hypothetical protein                          151   1e-37
28324.m000410 conserved hypothetical protein                           50   2e-07

>28281.m000367 conserved hypothetical protein
          Length = 375

 Score =  274 bits (700), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 129/133 (96%), Positives = 132/133 (99%)

Query: 1   VVGDRKGAVFGGLVEAPLRPTNKRKYQGTNSTFVFTNTPGHPVIFRPTGANRYFTLCSSD 60
           VVGDRKGAVFGGLVEAPLRPTNKRKYQGTNSTFVFTNTPG PVIFRPTGANRYFTLC++D
Sbjct: 243 VVGDRKGAVFGGLVEAPLRPTNKRKYQGTNSTFVFTNTPGDPVIFRPTGANRYFTLCTTD 302

Query: 61  FLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLAQSEDFEVKEVELWGFVYGTKYEEIL 120
           FLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLA+SEDFEVKEVELWGFVYGTKYEEIL
Sbjct: 303 FLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLARSEDFEVKEVELWGFVYGTKYEEIL 362

Query: 121 ALSRTEAPGICRW 133
           ALSRTEAPGICRW
Sbjct: 363 ALSRTEAPGICRW 375


>30008.m000811 conserved hypothetical protein
          Length = 339

 Score =  151 bits (381), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 86/107 (80%)

Query: 1   VVGDRKGAVFGGLVEAPLRPTNKRKYQGTNSTFVFTNTPGHPVIFRPTGANRYFTLCSSD 60
           +VGDR+GAVFGGL+E PL+PT KRKYQGTN +FVFT   G P +FRPTGANRY+ +C +D
Sbjct: 212 IVGDRQGAVFGGLLECPLKPTPKRKYQGTNQSFVFTTIYGEPRLFRPTGANRYYYMCLND 271

Query: 61  FLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLAQSEDFEVKEVEL 107
            LA+GG G+FAL +DGDLLNG+S   +TYGN CLA   +FE+K VE+
Sbjct: 272 LLALGGAGNFALCVDGDLLNGTSGPCDTYGNLCLAHKPEFELKNVEM 318


>28324.m000410 conserved hypothetical protein
          Length = 418

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 13/135 (9%)

Query: 1   VVGDRKGAVFGGLVEAPLRPTNKRKYQGTNSTFVFTNTPGHPVIFRPTGANRYFTLCSSD 60
           ++ D++  ++GG    P        + G   +F+F   P    IF+PTGAN     C+ +
Sbjct: 265 IIKDKEDCIYGGYASQPW--DRHGDFYGDMKSFLFQLYP-RASIFKPTGANNNVQWCALN 321

Query: 61  FLA------IGGGG---HFALYLDGDLLNGSSSVSETYGNPCLAQSEDFEVKEVELWGFV 111
           F +      IG GG   HF L+L      G +    T+G+P L+++     + +E WG  
Sbjct: 322 FSSESIPNGIGFGGRANHFGLFLSASFDLGHTFTCTTFGSPSLSKTNTIFPEVIECWGIT 381

Query: 112 Y-GTKYEEILALSRT 125
           + G + E+  A+  T
Sbjct: 382 HRGAQQEKQDAIKGT 396