Jatropha Genome Database

JcCA0151201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151201.10 + phase: 0 /partial
         (138 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013992 metalloendopeptidase, putative                          272   3e-74

>30170.m013992 metalloendopeptidase, putative
          Length = 844

 Score =  272 bits (696), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 130/137 (94%), Positives = 134/137 (97%)

Query: 2   HCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDTVAKRLACWISIQKCDK 61
           HCAPSE SILQQLEEVVVMPNYHRLFPGGARK+FNIFGSSYCDTVAKRL+CWISIQKCDK
Sbjct: 708 HCAPSELSILQQLEEVVVMPNYHRLFPGGARKIFNIFGSSYCDTVAKRLSCWISIQKCDK 767

Query: 62  DGDDRLRVCHSACQSYNLACGASLDCSDQTLFSSEEEGEGQCTGSGEMKLSWLNRLGIRF 121
           DGDDRLRVCHSACQSYNLACGASLDCSDQTLFSSEEEGEGQCTGSGEMK++WLNRLGIRF
Sbjct: 768 DGDDRLRVCHSACQSYNLACGASLDCSDQTLFSSEEEGEGQCTGSGEMKVTWLNRLGIRF 827

Query: 122 FSSNTSLKGMSVKYRQL 138
           FSSN S KGMSVKYRQL
Sbjct: 828 FSSNMSSKGMSVKYRQL 844