Jatropha Genome Database

JcCA0151141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151141.10 - phase: 0 /partial
         (521 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001431 GTP binding protein, putative                           725   0.0  

>29830.m001431 GTP binding protein, putative
          Length = 779

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/521 (75%), Positives = 421/521 (80%)

Query: 1   MSMGEGNVGETTETQTEDSPLDPEKQLSDIPHGKNENLVKENGLHDGIPLVENTQEQLVQ 60
           MSM E +V +  E+QTE+S LD EK+LSD+P+GK  NL +ENGLHD   L ENT EQLVQ
Sbjct: 1   MSMDEDHVVQVPESQTEESSLDNEKKLSDMPNGKKGNLAEENGLHDDTSLKENTYEQLVQ 60

Query: 61  MVIELKFQNEFLKSQFEGLKNNQSASEESQQRTEVSDQKTVGSTDVXXXXXXXXXXXXXX 120
           MVIELK QNEF KSQFE LKN Q A++ESQQR E SD ++  S++V              
Sbjct: 61  MVIELKLQNEFFKSQFEDLKNLQVANDESQQRVEASDHESGESSEVEALHKRIESLSREL 120

Query: 121 XXXKQTRGAAEVALNHLREAYSEADAKAQELLTKLTEAQQKLDQEIKEREEKYSELDSKF 180
              KQ  GA E AL HLRE YSEADAKAQ+L  KL EAQQKLDQEIKEREEKY+ELDSKF
Sbjct: 121 DEEKQISGATEEALRHLREVYSEADAKAQDLSVKLAEAQQKLDQEIKEREEKYTELDSKF 180

Query: 181 QRLHKRAKQRIQEVQKEKDDLEARFRDVNETAERASSQHSALQQELERTRQQANDALRAM 240
           QRLHKRAKQRIQEVQKEKDDLEARFRDVNE AERASSQ SALQQELERTRQQANDAL+AM
Sbjct: 181 QRLHKRAKQRIQEVQKEKDDLEARFRDVNEAAERASSQQSALQQELERTRQQANDALKAM 240

Query: 241 DAERQQLRSANNKLRDNIEELRRSFQPKENALEALQQTLLEKEQMLEDMRGLLQSAEEKR 300
           DAERQQLRSANNKLRDNIEELR SFQPKENALE LQQTLLEKEQMLEDMRGLLQSAEEKR
Sbjct: 241 DAERQQLRSANNKLRDNIEELRHSFQPKENALETLQQTLLEKEQMLEDMRGLLQSAEEKR 300

Query: 301 QASIAELSAKHQKNIENLEGQLNDALADRTKATETISSLQVLIAEKESEIAEMDAASSGE 360
           QASIAELSAKHQK++ENLE QL DA+ADR+KATETISSLQVLIAEKES+IAEMDAASSGE
Sbjct: 301 QASIAELSAKHQKSMENLESQLADAVADRSKATETISSLQVLIAEKESKIAEMDAASSGE 360

Query: 361 VARLRAALESVKGXXXXXXXXXXXXXXXXXXXSQGLKMKLEIAESNCIRAEIEAAKMRSQ 420
            ARL+AALESVKG                   SQ LKMKLEIAESNCIRAEIEAAKMRSQ
Sbjct: 361 AARLKAALESVKGEIAQLKNKHEKEKESWETASQTLKMKLEIAESNCIRAEIEAAKMRSQ 420

Query: 421 LESEVSVQRQMLNKKDAELLAAKEEINRLETEFSSYKVRAHALLQRKDSELAAAMDSEQL 480
           LESE +VQ QMLNKKD ELLAAKEEINRLE EFSSYKVRAHALLQ+KD++L AA DSEQL
Sbjct: 421 LESEETVQSQMLNKKDGELLAAKEEINRLENEFSSYKVRAHALLQKKDADLIAAQDSEQL 480

Query: 481 RXXXXXXXXXXXXXSIISAERDKALQDLQDALAHRDKELAE 521
           +             S +SAERDKALQDLQDALA  DKE+AE
Sbjct: 481 KALEEALQEAEREVSSVSAERDKALQDLQDALADCDKEVAE 521