Jatropha Genome Database

JcCA0151101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151101.10 - phase: 0 
         (651 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014378 conserved hypothetical protein                          933   0.0  
29679.m000383 hypothetical protein                                     88   1e-17
30063.m001425 hypothetical protein                                     69   6e-12

>30147.m014378 conserved hypothetical protein
          Length = 653

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/660 (72%), Positives = 540/660 (81%), Gaps = 16/660 (2%)

Query: 1   MAVLCFVLDLCSLSPPLLRDLKQ----LANLYAIXXXXXXXXXXXXLRDRIGLCYVSNNR 56
           M  LCFVLDLCSLSP LLRDLKQ    L N YAI            L DRIGLCY+  NR
Sbjct: 1   MVALCFVLDLCSLSPSLLRDLKQCLLQLGNSYAISPPSSRHRFDS-LGDRIGLCYIFKNR 59

Query: 57  ISSSHELKIAYSPRGNFNLRDFHHAVNNLPGDAFLPEIDDSGALLSSDVKLPSVLSDQVL 116
           ISSS ELKIAY PRGNF+LRDFH AVNNLP DAFLPEIDDSGAL  SD KL SVLSDQV+
Sbjct: 60  ISSSRELKIAYHPRGNFHLRDFHDAVNNLPTDAFLPEIDDSGALRRSDAKLSSVLSDQVV 119

Query: 117 YSWGGKDFMRKVIVLSSCLTEKIDSDMKGILADAADKCVSVEFVLFEQSASYLSNVQENI 176
           YSW  KDFMRKVIVLSSCL E IDS +K  L DAADKCVSVEF+LFE S+SY SN+QENI
Sbjct: 120 YSWEIKDFMRKVIVLSSCLPENIDSALKITLMDAADKCVSVEFLLFELSSSYFSNMQENI 179

Query: 177 NCFATSLSDLDNCSFQTYLPD---TRVFHSLVKRWLQDLKDDMEEPLQARFIFKSNLVGS 233
           NCF TSLSDLDNCSFQTY+PD   +R+FHSL KRWLQDL+DD++EPLQA FIF++NLVGS
Sbjct: 180 NCFLTSLSDLDNCSFQTYIPDFADSRLFHSLTKRWLQDLEDDIDEPLQACFIFQTNLVGS 239

Query: 234 LNQISCSLSISVSQIIDGFSACQTCRCHGIVLDNAVKDKADRPSCPVTGNDLGTANVIDN 293
           LN ISCSLSISV QIID FSACQTCRCHG++LD+A KDK +R SCPVTG+DLGTA+V+DN
Sbjct: 240 LNHISCSLSISVRQIIDEFSACQTCRCHGVLLDHAAKDKLERLSCPVTGHDLGTADVVDN 299

Query: 294 SVKVGDKTILFMPSFQSSMKLHQVSSPIDFNVIERTNLSSLSEGVMFGTSHYVAPSACNE 353
           SVKVGDKTILFMPSFQSSMK+HQ+SSPI+FN+IERTNL SL+EGV+FGT ++VAPSACNE
Sbjct: 300 SVKVGDKTILFMPSFQSSMKVHQLSSPIEFNIIERTNLKSLNEGVIFGTPYFVAPSACNE 359

Query: 354 IETSSDEMFKPELNFQLFQGICSALHSMDQGLICSSYCNVETMRETAFHCYYILQPSENG 413
           +ETSSDEM +PELN QLFQGIC+ LHSMD+GL+CSSYCNV+TM+ TAF CYYIL PS+NG
Sbjct: 360 VETSSDEMSQPELNSQLFQGICNYLHSMDEGLVCSSYCNVDTMKGTAFPCYYILLPSDNG 419

Query: 414 PMXXXXXXXXXXVLPRPDINPFIHSSVSKDIQNAIHESVLKIELRDYNPVLHERGFHQKL 473
           PM          VLP  ++N FI SS+SKDIQN I  S+LKI+LRDYNPVLHERG H+KL
Sbjct: 420 PMLLRRLASLEEVLPMLEVNQFIDSSMSKDIQNTIQTSLLKIDLRDYNPVLHERGLHRKL 479

Query: 474 NLLVKESLQFGSIPPKQNEA-SELNSKQPNSSELNIKPNRILDTIVVEDEPSLLNRTVKE 532
           NLL+KES QF ++ PK NEA S LNS Q NS E   + N I    VV+DE   L   V E
Sbjct: 480 NLLIKESFQFVTVTPKLNEATSGLNSNQLNSLE---QSNCI---TVVKDEAPQLKMKVGE 533

Query: 533 DKTT-SIAEEWEQLVVSEDPSIYSPACTSKPKIDILVLSSPDSNKQLDVKTSKILERLEV 591
           DKT+ SIAEEWEQLVVSE P++YSP   SK K+D+LVLSSPD+NKQLDVKTS+ILERLEV
Sbjct: 534 DKTSYSIAEEWEQLVVSEVPNLYSPTPVSKAKVDMLVLSSPDTNKQLDVKTSRILERLEV 593

Query: 592 PRQLKTKITSPILTGSSLSETGMPTKRPLIPFQHTHATEQSWSSSQLMKPNFQRAKRKHK 651
           P+QLKTK+TSPI T SS SETG P K+P +PFQ ++AT+QS +SSQLMKPNFQR KRKHK
Sbjct: 594 PKQLKTKVTSPIFTSSSFSETGAPIKKPPVPFQPSNATDQSLTSSQLMKPNFQRLKRKHK 653


>29679.m000383 hypothetical protein
          Length = 319

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 71/117 (60%), Gaps = 9/117 (7%)

Query: 80  HAVNNLPGDAFLPEIDDSGALLSSDVKLPSVLSDQVLYSWGGKDFMRKVIVLSSCLTEKI 139
           +++ NLP D+FL   DDS  L  SD K  S+LSD+ +Y +     +RKV+VL SCL+E +
Sbjct: 26  YSIKNLPVDSFLNRFDDSEYLRRSDSKSYSMLSDETVYYF----IVRKVMVLRSCLSENV 81

Query: 140 DSDMKGILADAADKCVSVEFVLFEQSASYLSNVQENINCFATSLSDLDNCSFQTYLP 196
           DS +K  L  AA KCVSV     EQ +  LSN++ENI    TSL D  N    TY+P
Sbjct: 82  DSSLKITLMYAAGKCVSV-----EQCSGLLSNMRENIKFSLTSLPDFYNYFSHTYIP 133


>30063.m001425 hypothetical protein
          Length = 371

 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/124 (48%), Positives = 77/124 (62%), Gaps = 23/124 (18%)

Query: 75  LRDFHHAVNNLPGDAFLPEIDDSGAL------LSSDVKLPSVLSDQVLYSWGGKD-FMRK 127
           L+D+H A N+L     LPE DDSGAL      +  D KL S+LS++ +YS   K+ FMRK
Sbjct: 6   LKDYH-AANDL-----LPEFDDSGALRRQSTSVLPDAKLFSILSNEAVYSSEIKESFMRK 59

Query: 128 VIV-LSSC---LTEKIDSDMKGI-LADAAD--KCVSVEFVLFEQSASYLSNV--QENINC 178
           V V +SSC     E +DS +  I L  AAD  KCVSVEFV FEQS+  +SN+  QEN+ C
Sbjct: 60  VFVFISSCSLPENENLDSRLFRITLMYAADEHKCVSVEFV-FEQSSISVSNMQQQENLKC 118

Query: 179 FATS 182
             T+
Sbjct: 119 SVTT 122