Jatropha Genome Database

JcCA0150301.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0150301.20 + phase: 0 
         (479 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29646.m001117 acyl-CoA oxidase, putative                              751   0.0  
29948.m000719 acyl-CoA oxidase, putative                              202   3e-52
29713.m000177 acyl-CoA oxidase, putative                               79   4e-15
28176.m000270 acyl-CoA dehydrogenase, putative                         62   8e-10

>29646.m001117 acyl-CoA oxidase, putative
          Length = 625

 Score =  751 bits (1939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/432 (82%), Positives = 386/432 (89%), Gaps = 12/432 (2%)

Query: 56  MRKLLDMHNIDDRDWLFGLMRQSKVFNPREKGGRVYVAPDYNQSMEQQREITMRRVAYLL 115
           MRKLLDMHNI+DRDWLFGLMRQSKVFNP EKGGRVY  PDYNQS EQQRE+TM+R+ Y+L
Sbjct: 1   MRKLLDMHNIEDRDWLFGLMRQSKVFNPVEKGGRVYAVPDYNQSTEQQREMTMKRIGYML 60

Query: 116 ERGVFDGWLTGKGLESEMKKWPCLKLLACLITPSLLNSVFTSFY-----------ERHHD 164
           ERGVF+GWLTGKGLESEMKK+  L++   +   SL   +   F+           +RHHD
Sbjct: 61  ERGVFNGWLTGKGLESEMKKFAFLEVTG-IFDHSLSVKLGVHFFLWGGAIQFFGTKRHHD 119

Query: 165 KWLRDTETYAIKGCFAMTELGHGSNVRGIETVTIYDSNTGEFVINTPCESAQKYWIGGAA 224
           KWLR+TETYA+KGCFAM+ELGHGSNVRGIETV  YDSNTGEFVINTPCESAQKYWIGGAA
Sbjct: 120 KWLRNTETYALKGCFAMSELGHGSNVRGIETVATYDSNTGEFVINTPCESAQKYWIGGAA 179

Query: 225 NHATHTIVFSQLNINGMSEGVHAFIAQIRDADGNIWPNIRIADCGHKIGLNGVDNGRIWF 284
           NHATHTIVFSQLNING ++GVHAFIAQIRD +GNI PNIRIADCGHKIGLNGVDNGRIWF
Sbjct: 180 NHATHTIVFSQLNINGTNQGVHAFIAQIRDTEGNICPNIRIADCGHKIGLNGVDNGRIWF 239

Query: 285 DNVRIPRENLLNSVADVSPDGQYLSAIKDADQRFAAFLAPLTSGRVTIAVSAIYSSKIGL 344
           DN+RIPRENLLNSVADVSPDGQYLSAIKD DQRFAAFLAPLTSGRVTIAVSAIYSSKI L
Sbjct: 240 DNMRIPRENLLNSVADVSPDGQYLSAIKDPDQRFAAFLAPLTSGRVTIAVSAIYSSKISL 299

Query: 345 ATAIRYSLSRQAFSVTPNGPEVLLLDYPSHQRRLLPLLAKTYAMSFAGNYLKMIYWNRTP 404
           A AIRYSL+R+AFS+ PN PEVLLLDYPSHQRRLLPLLAKTYAMSFAGN LKMIYW R P
Sbjct: 300 AIAIRYSLTRRAFSIRPNEPEVLLLDYPSHQRRLLPLLAKTYAMSFAGNSLKMIYWKRAP 359

Query: 405 ETNKTLHVVSSAFKATLTWHDMRTLQECREACGGQGLKTENRVGHLKSEFDVQSTFEGDN 464
           ETNKTLHV+SSAFKAT+TWH+MRTLQECREACGGQGLKTENRVG+LKSEFDVQ+TFEGDN
Sbjct: 360 ETNKTLHVISSAFKATMTWHNMRTLQECREACGGQGLKTENRVGNLKSEFDVQTTFEGDN 419

Query: 465 NVLMQQVKLVVF 476
           NVLMQQV   +F
Sbjct: 420 NVLMQQVSKALF 431


>29948.m000719 acyl-CoA oxidase, putative
          Length = 664

 Score =  202 bits (513), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/323 (36%), Positives = 168/323 (52%), Gaps = 15/323 (4%)

Query: 160 ERHHDKWLRDTETYAIKGCFAMTELGHGSNVRGIETVTIYDSNTGEFVINTPCESAQKYW 219
           E    KWL       I GC+A TELGHGSNV+G+ET   +D  T EFVI++P  ++ K+W
Sbjct: 116 EEQQKKWLPLAHKMQIIGCYAQTELGHGSNVQGLETTATFDLETDEFVIHSPTLTSSKWW 175

Query: 220 IGGAANHATHTIVFSQLNINGMSEGVHAFIAQIRDADGNI-WPNIRIADCGHKIG---LN 275
            GG    +TH +V+++L   G   GVH FI Q+R  D ++  P I + D G K G    N
Sbjct: 176 PGGLGKVSTHAVVYARLITEGREHGVHGFIVQLRSLDDHMPLPGITVGDIGMKFGSGAYN 235

Query: 276 GVDNGRIWFDNVRIPRENLLNSVADVSPDGQYLSAIKDADQRFAAFLAPLTSGRVTIAVS 335
            +DNG + FD+VRIPR  +L  V  V+ +G+ + + K   Q     +  +   R TI   
Sbjct: 236 TMDNGVLRFDHVRIPRNQMLMRVMQVTREGKCVQS-KVPRQLIYGTMVYV---RQTIVAD 291

Query: 336 AIYSSKIGLATAIRYSLSRQAFSVTPNGPEVLLLDYPSHQRRLLPLLAKTYAMSFAGNYL 395
           A  +    +  A RYS  R+ F     G E  ++DY + Q RL PLLA  YA  F G +L
Sbjct: 292 ASAALSRAVCIATRYSAVRRQFGSNDGGVETQVIDYKTQQSRLFPLLASAYAFRFVGEWL 351

Query: 396 KMIYWNRTP-------ETNKTLHVVSSAFKATLTWHDMRTLQECREACGGQGLKTENRVG 448
           K +Y + T         T    H  ++  K+  T      ++ECR+ CGG G  T + + 
Sbjct: 352 KWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTSFTADAIEECRKLCGGHGYLTASGLP 411

Query: 449 HLKSEFDVQSTFEGDNNVLMQQV 471
            L + +    T+EGDN VL+ QV
Sbjct: 412 ELFAVYVPACTYEGDNVVLLLQV 434


>29713.m000177 acyl-CoA oxidase, putative
          Length = 252

 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 48/75 (64%)

Query: 153 SVFTSFYERHHDKWLRDTETYAIKGCFAMTELGHGSNVRGIETVTIYDSNTGEFVINTPC 212
           S+     ++H DK+    +     GCFAMTEL HGSNV+G++T+  +D  T EFVINTP 
Sbjct: 168 SIINIGTKKHRDKYFDGIDNLDYPGCFAMTELHHGSNVQGLQTIATFDPLTDEFVINTPH 227

Query: 213 ESAQKYWIGGAANHA 227
           + A K+WIG AA H 
Sbjct: 228 DGAIKWWIGNAAVHG 242


>28176.m000270 acyl-CoA dehydrogenase, putative
          Length = 440

 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 124/307 (40%), Gaps = 46/307 (14%)

Query: 160 ERHHDKWLRDTETYAIKGCFAMTELGHGSNVRGIETVTIYDSNTGEFVINTPCESAQKYW 219
           E    K+L      +   C+A+TE  +GS+   ++T        G ++++      QK W
Sbjct: 154 EAQKQKYLPSLAQLSTVACWALTEPEYGSDASALKTTA--RKVEGGWILD-----GQKRW 206

Query: 220 IGGAANHATHTIVFSQLNINGMSEGVHAFIAQIRDADGNIWPNIRIADCGHKIGLNGVDN 279
           IG +   A   +VF++   N  +E ++ +I + +DA     P +      +KIGL  V N
Sbjct: 207 IGNS-TFADVLVVFAR---NTSTEQINGYIVK-KDA-----PGLTATKIENKIGLRMVQN 256

Query: 280 GRIWFDNVRIPRENLLNSVADVSPDGQYLSAIKDADQRFAAFLAPLTSGRVTIAVSAIYS 339
           G I    V IP E+ L  V          ++ +D ++  A         RV +A   I  
Sbjct: 257 GDILLKQVFIPDEDRLPGV----------NSFQDTNKVLAV-------SRVMVAWQPIGI 299

Query: 340 SKIGLATAIRYSLSRQAFSVTPNGPEVLLLDYPSHQRRLLPLLAKTYAMSFAGNYLKMIY 399
           S        RY   R+ F          L  +  +Q++L+ +L    AM   G  L  +Y
Sbjct: 300 SMGIYDMCHRYLKERKQFGAP-------LAAFQINQQKLVQMLGNVQAMVLVGWRLCKLY 352

Query: 400 WNRTPETNKTLHVVSSAFKATLTWHDMRTLQECREACGGQGLKTENRVGHLKSEFDVQST 459
                ET K     +S  KA +T     T    RE  GG G+  +  V     + +   T
Sbjct: 353 -----ETGKMTSGHASMAKAWITSKARETAATGRELLGGNGILADFLVAKAFCDLEPIYT 407

Query: 460 FEGDNNV 466
           +EG  ++
Sbjct: 408 YEGTYDI 414