Jatropha Genome Database

JcCA0149501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149501.10 - phase: 0 /pseudo/partial
         (833 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29585.m000607 2-oxoglutarate dehydrogenase, putative                  588   e-168
29585.m000604 2-oxoglutarate dehydrogenase, putative                  415   e-116
29585.m000605 oxoglutarate dehydrogenase, putative                    382   e-106
36292.m000013 oxoglutarate dehydrogenase, putative                    147   3e-35
29585.m000606 hypothetical protein                                    125   8e-29

>29585.m000607 2-oxoglutarate dehydrogenase, putative
          Length = 1021

 Score =  588 bits (1516), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 279/379 (73%), Positives = 314/379 (82%), Gaps = 7/379 (1%)

Query: 1   MAWFXXXXXXXXXXXXKTLSQTASYASRIQCLPWRNRSFHSTIFRAAA-----PNSQHLA 55
           MAWF            +TLSQ+ SY  R + +P +NR FH+T+F++ A     P    L+
Sbjct: 1   MAWFRAGASVARLAIRRTLSQSGSYTVRTRVVPSQNRYFHTTVFKSKAQAAPVPRPVPLS 60

Query: 56  GLSDNFLDATSSVYLEELQKAWEVDPNNVDESWDNFFRNFVGQNQKVPSAGVSGQTIQES 115
            L+D+FLD TSSVYLEELQ+AWE DP++VDESWDNFFRNFVGQ    P  G+SGQTIQES
Sbjct: 61  RLTDSFLDGTSSVYLEELQRAWEADPSSVDESWDNFFRNFVGQAATSP--GISGQTIQES 118

Query: 116 MSLLLLVRAYQVNGHMKAKLDPLDLEEREIPDELDPSFHGFTEADLDREFFLGVWKMSGF 175
           M LLLLVRAYQVNGHMKAKLDPL LEEREIP++LDP+ +GF EADLDREFFLGVW+MSGF
Sbjct: 119 MRLLLLVRAYQVNGHMKAKLDPLGLEEREIPEDLDPALYGFAEADLDREFFLGVWRMSGF 178

Query: 176 LSDNRPVMTLRSILTRLEQAYCGHVGYEYMHIDDSAKCNWLRHKIETPVPMTYNQDRLEL 235
           LS+NRPV TLRSILTRLEQAYCG +GYEYMHI D  KCNWLR KIETP PM YN+ R E+
Sbjct: 179 LSENRPVQTLRSILTRLEQAYCGSIGYEYMHIADRDKCNWLRDKIETPTPMQYNRQRREV 238

Query: 236 LLDRLTWSTQFENFLATKMKAAKRFGLEGGETLIPGMKEMFDRASDLGVENIVVGMPHRG 295
           +LDRL WSTQFENFLATK   AKRFGLEGGETLIPGMKEMFDR++DLGVE+IV+GMPHRG
Sbjct: 239 ILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRSADLGVESIVIGMPHRG 298

Query: 296 RLNVLGNVFRKPLAQIFSEFDKNAKVGDEIGVYSGTGDVKYHLGTSYDRPTRAGKRIHLS 355
           RLNVLGNV RKPL QIFSEF    K  DE+G+Y+GTGDVKYHLGTSYDRPTR GKRIHLS
Sbjct: 299 RLNVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLS 358

Query: 356 LVANPSHLEAVDPLVLGKT 374
           LVANPSHLEAVDP+V+GKT
Sbjct: 359 LVANPSHLEAVDPVVVGKT 377



 Score =  572 bits (1474), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 262/320 (81%), Positives = 299/320 (93%)

Query: 514 SLEIYQNKLLESGKITQEDIDRIHKKVNAILNEEYSNSKDYVSKRSDWLSSHWAGFKSPE 573
           SL+IY+NKLLESG++ +EDI RI +KV  ILNEE+  SKDYV KR DWLSSHWAGFKSPE
Sbjct: 525 SLQIYKNKLLESGQVGEEDISRIQEKVITILNEEFLASKDYVPKRRDWLSSHWAGFKSPE 584

Query: 574 QLSRIRNTGVKPDILKEVGKAITFLPDDLKPHKQVKKIYSDRAQMIETGEGIDWALAEAL 633
           QLSRIRNTGV+P+ILK VGKAIT +PD+ KPH+ VKK+Y  RAQMIETGEGIDWA+AEAL
Sbjct: 585 QLSRIRNTGVQPEILKNVGKAITTIPDNFKPHRAVKKVYEQRAQMIETGEGIDWAVAEAL 644

Query: 634 AFGTLLLEGNHVRLSGQDVERGTFSHRHAMVHDQESGKKYCPLDHVMVDQDEEMFTVSNS 693
           AF TLL+EGNHVRLSGQDVERGTFSHRH+++HDQE+G+KYCPLDHV+++Q+EEMFTVSNS
Sbjct: 645 AFATLLVEGNHVRLSGQDVERGTFSHRHSVIHDQETGEKYCPLDHVIMNQNEEMFTVSNS 704

Query: 694 SLSEFGVLGFELGYSMENPNALVMWEAQFGDFSNGAQVMFDQFLSGGESKWLRQSGLVVL 753
           SLSEFGVLGFELGYSME+PN+LV+WEAQFGDFSNGAQV+FDQFLS GESKWLRQ+GLVVL
Sbjct: 705 SLSEFGVLGFELGYSMESPNSLVIWEAQFGDFSNGAQVIFDQFLSSGESKWLRQTGLVVL 764

Query: 754 LPHGYDGQGPEHSSARLERFLQMNDSNPYVVPEMDSLVRKQIQECNWQVVNVTTPANYFH 813
           LPHGYDGQGPEHSSARLERFLQM+D NP V+PEM+  +RKQIQECNWQVVNVTTPANYFH
Sbjct: 765 LPHGYDGQGPEHSSARLERFLQMSDDNPCVIPEMEPTLRKQIQECNWQVVNVTTPANYFH 824

Query: 814 VLRRQVHREFRKPLVVMSPK 833
           VLRRQ+HR+FRKPL+VM+PK
Sbjct: 825 VLRRQLHRDFRKPLIVMAPK 844


>29585.m000604 2-oxoglutarate dehydrogenase, putative
          Length = 529

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/306 (66%), Positives = 229/306 (74%), Gaps = 50/306 (16%)

Query: 514 SLEIYQNKLLESGKITQEDIDRIHKKVNAILNEEYSNSKDYVSKRSDWLSSHWAGFKSPE 573
           SL+IY+NK LESG++T+E  DRIH+KVN ILNEEYSNSK Y  K  +WLSS W+GFKSPE
Sbjct: 114 SLKIYENKFLESGEVTEEVTDRIHRKVNRILNEEYSNSKYYSGKTREWLSSQWSGFKSPE 173

Query: 574 QLSRIRNTGVKPDILKEVGKAITFLPDDLKPHKQVKKIYSDRAQMIETGEGIDWALAEAL 633
           Q+S+IRNTG+  D+LK V                                          
Sbjct: 174 QISQIRNTGINRDVLKTV------------------------------------------ 191

Query: 634 AFGTLLLEGNHVRLSGQDVERGTFSHRHAMVHDQESGKKYCPLDHVMVDQDEEMFTVSNS 693
                   G+HVR SGQDVERGTFS RHAMVHDQ SGK+YCPL+H+M+DQ+EEM TVS S
Sbjct: 192 --------GSHVRFSGQDVERGTFSQRHAMVHDQGSGKQYCPLNHIMLDQNEEMLTVSFS 243

Query: 694 SLSEFGVLGFELGYSMENPNALVMWEAQFGDFSNGAQVMFDQFLSGGESKWLRQSGLVVL 753
           SL EFGVLGFE GYSMENPNALVMWEAQFGDFSNG Q MFDQFL GGESKWLRQSGLV+L
Sbjct: 244 SLLEFGVLGFESGYSMENPNALVMWEAQFGDFSNGVQAMFDQFLRGGESKWLRQSGLVLL 303

Query: 754 LPHGYDGQGPEHSSARLERFLQMNDSNPYVVPEMDSLVRKQIQECNWQVVNVTTPANYFH 813
           LPHGYDGQGPEHSSARLE FL M+D++PYV PEM+S VRK+IQ+CNWQVVNVTTPANYFH
Sbjct: 304 LPHGYDGQGPEHSSARLECFLMMSDNDPYVGPEMESSVRKRIQKCNWQVVNVTTPANYFH 363

Query: 814 VLRRQV 819
           VLRRQV
Sbjct: 364 VLRRQV 369


>29585.m000605 oxoglutarate dehydrogenase, putative
          Length = 244

 Score =  382 bits (982), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/277 (69%), Positives = 206/277 (74%), Gaps = 33/277 (11%)

Query: 116 MSLLLLVRAYQVNGHMKAKLDPLDLEEREIPDELDPSFHGFTEADLDREFFLGVWKMSGF 175
           M LLLLVRAYQV+GH KA LDPLDLEE EIPD+LDP+FHGF EADLDREFFLGVW  SGF
Sbjct: 1   MRLLLLVRAYQVHGHTKANLDPLDLEESEIPDDLDPAFHGFAEADLDREFFLGVWNTSGF 60

Query: 176 LSDNRPVMTLRSILTRLEQAYCGHVGYEYMHIDDSAKCNWLRHKIETPVPMTYNQDRLEL 235
            S+N  VMTL SILTRLEQAYCGH+ YEYMHID+  KCNWLR +IETP P+ Y+      
Sbjct: 61  SSNNGSVMTLLSILTRLEQAYCGHIRYEYMHIDNREKCNWLRDRIETPEPVRYS------ 114

Query: 236 LLDRLTWSTQFENFLATKMKAAKRFGLEGGETLIPGMKEMFDRASDLGVENIVVGMPHRG 295
               L W                          IPGMKEMFDRASDLGVENIVVGMPHRG
Sbjct: 115 ----LRW-----------------------RDFIPGMKEMFDRASDLGVENIVVGMPHRG 147

Query: 296 RLNVLGNVFRKPLAQIFSEFDKNAKVGDEIGVYSGTGDVKYHLGTSYDRPTRAGKRIHLS 355
           RLNVLGNVFRKPLAQIFSEFDKNAK  DE+G+Y GTGDVKYHL TSYDRPTRAG+RIHLS
Sbjct: 148 RLNVLGNVFRKPLAQIFSEFDKNAKTVDEVGLYKGTGDVKYHLKTSYDRPTRAGRRIHLS 207

Query: 356 LVANPSHLEAVDPLVLGKTEQSNITQMISTGLKIWLF 392
           LVANPS LEAVDP+VLGKT         +   KIWLF
Sbjct: 208 LVANPSRLEAVDPVVLGKTRAKQYYTDDADRTKIWLF 244


>36292.m000013 oxoglutarate dehydrogenase, putative
          Length = 276

 Score =  147 bits (370), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 117/196 (59%), Gaps = 15/196 (7%)

Query: 110 QTIQESMSLLLLVRAYQVNGHMKAKLDPLDLEER-EIPDELDPSFHGFTEADLDREFFLG 168
           Q  ++S+  ++++RAY++ GH+ AKLDPL +    E   EL P  +GFTEAD DR+ F+ 
Sbjct: 89  QATRDSVRAIMMIRAYRMRGHLHAKLDPLGIAAPVEDYKELSPEAYGFTEADFDRKIFI- 147

Query: 169 VWKMSGFLSDN---RPVMTLRSILTRLEQAYCGHVGYEYMHIDDSAKCNWLRHKIETPVP 225
                    DN       T+R ++  LE+ YC  +G E+MHI +  +  W++ +IE P  
Sbjct: 148 ---------DNVLGLEFATIREMIEILERTYCSTLGVEFMHISNPEEKAWIQERIEGPDK 198

Query: 226 -MTYNQDRLELLLDRLTWSTQFENFLATKMKAAKRFGLEGGETLIPGMKEMFDRASDLGV 284
            + +N +R + +L ++  +  +E FL  K K  KRFGL+GGE+LIP ++++    S LG+
Sbjct: 199 GIAFNPERKKAILQKVIEAEGYEQFLDVKFKGTKRFGLDGGESLIPALEQILKSGSQLGL 258

Query: 285 ENIVVGMPHRGRLNVL 300
              V GM HRGRLNVL
Sbjct: 259 REAVFGMAHRGRLNVL 274


>29585.m000606 hypothetical protein
          Length = 102

 Score =  125 bits (314), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 60/102 (58%), Positives = 71/102 (69%), Gaps = 5/102 (4%)

Query: 1   MAWFXXXXXXXXXXXXKTLSQTASYASRIQCLPWRNRSFHSTIFR-----AAAPNSQHLA 55
           MAWF            K+LSQ  SYA+RIQ  P +NRSF STIFR     AA   S  L 
Sbjct: 1   MAWFRAANTVARIAIRKSLSQNGSYATRIQSFPSQNRSFRSTIFRPNLQPAATTRSVQLF 60

Query: 56  GLSDNFLDATSSVYLEELQKAWEVDPNNVDESWDNFFRNFVG 97
           GL+DNFLD +SS+YLEELQ+AWE +PN++DESWDNFF+NFVG
Sbjct: 61  GLTDNFLDGSSSLYLEELQRAWEANPNSIDESWDNFFKNFVG 102