Jatropha Genome Database

JcCA0148271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0148271.10 + phase: 0 /pseudo/partial
         (164 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28094.m000175 strictosidine synthase, putative                        211   9e-56
30221.m002257 strictosidine synthase, putative                        127   3e-30
28094.m000178 strictosidine synthase, putative                        112   6e-26
29577.m000452 strictosidine synthase, putative                         84   3e-17
30138.m003846 strictosidine synthase, putative                         67   3e-12
29739.m003743 Adipocyte plasma membrane-associated protein, puta...    57   3e-09

>28094.m000175 strictosidine synthase, putative
          Length = 372

 Score =  211 bits (538), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 103/116 (88%), Positives = 109/116 (93%)

Query: 48  FAVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVG 107
           FA LPGFPDNIRRNSKGEFWVALHAK+G  AKL LSNSWIGKTLLK PLSFKQLHSLLVG
Sbjct: 257 FAKLPGFPDNIRRNSKGEFWVALHAKEGFLAKLALSNSWIGKTLLKFPLSFKQLHSLLVG 316

Query: 108 GKPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGVYNL 163
           GKPHATAIKLS DGKI++VLEDC+GK+LRFISEVEEKDGKL IGSVLMPFLG+YNL
Sbjct: 317 GKPHATAIKLSGDGKIVQVLEDCDGKRLRFISEVEEKDGKLWIGSVLMPFLGIYNL 372


>30221.m002257 strictosidine synthase, putative
          Length = 391

 Score =  127 bits (318), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 60/115 (52%), Positives = 85/115 (73%)

Query: 49  AVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVGG 108
           A+LPGFPDN+R N +G FWVA+H ++  ++ +      +   LLKLP+S K  +   +GG
Sbjct: 276 AILPGFPDNVRTNEEGNFWVAVHCRRTYYSYICALYPKLRTFLLKLPISAKIHYLFHIGG 335

Query: 109 KPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGVYNL 163
           + HA A+K S +GK+L++LED +GK ++ ISEVEE+DGKL +GSVLMPF+GVYNL
Sbjct: 336 RLHAVAVKYSPEGKLLQILEDSQGKVVKAISEVEERDGKLWMGSVLMPFVGVYNL 390


>28094.m000178 strictosidine synthase, putative
          Length = 375

 Score =  112 bits (281), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 82/115 (71%), Gaps = 2/115 (1%)

Query: 48  FAVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVG 107
           FA +PGFPDNI+R+ +G +WVA+++++  F + VLS+ WIG +L+KLP    +++S+L  
Sbjct: 261 FAQVPGFPDNIKRSPRGGYWVAINSRRDKFLEWVLSHPWIGNSLIKLPFDLMKIYSILGK 320

Query: 108 GKPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGVYN 162
            +    A++L E+G ILEV ED    + + +SEV EKDGKL IGS+ +PF+G Y+
Sbjct: 321 YRGTGMAVRLDENGDILEVFEDR--NRFKTLSEVMEKDGKLWIGSINLPFVGRYD 373


>29577.m000452 strictosidine synthase, putative
          Length = 372

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 1/105 (0%)

Query: 49  AVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVGG 108
           A LPGFPDNIR N KG +WVA+   +    +++  N WI     +LP+    L + L+G 
Sbjct: 258 ANLPGFPDNIRVNDKGHYWVAIDCCRTRAQEILTHNPWIRSVYFRLPIRMSIL-ARLMGM 316

Query: 109 KPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSV 153
           K +      +E+G+ILEVLED +G  ++ +SEV E  GKL IG+V
Sbjct: 317 KMYTVVSLFNENGEILEVLEDPKGVVMKLVSEVREVQGKLWIGTV 361


>30138.m003846 strictosidine synthase, putative
          Length = 352

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 28/113 (24%)

Query: 48  FAVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVG 107
           FA L  FPDNIRRN  G+FWVAL+  +G                             L G
Sbjct: 265 FASLDRFPDNIRRNDNGDFWVALNTARGK----------------------------LQG 296

Query: 108 GKPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGV 160
                  I+ +E G++++V+    G  L  +SE+EE DG+L  GS   P++G 
Sbjct: 297 AVEDPVGIRFNEYGRVVQVVNGNGGDTLDSVSEIEEHDGRLWFGSPTQPYVGT 349


>29739.m003743 Adipocyte plasma membrane-associated protein,
           putative
          Length = 356

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 51  LPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVGGKP 110
           LPG PDNI     G FW+ L        + V ++    K    L  SF +L  L+ G + 
Sbjct: 245 LPGAPDNINLAPDGSFWICLLQVAADGLEFVHTS----KASKHLVASFPKLIELVNGVEK 300

Query: 111 HATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLG 159
           +A  + ++ DGKI    +D +GK + F++   E DG L +GS+   F+G
Sbjct: 301 NAMVVNVAADGKITRKFDDPDGKVVSFVTSAVEFDGHLYLGSLKNNFVG 349