Jatropha Genome Database

JcCA0147671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147671.10 + phase: 2 /partial
         (75 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005461 oligosaccharyl transferase, putative                     55   7e-09

>29912.m005461 oligosaccharyl transferase, putative
          Length = 779

 Score = 55.1 bits (131), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/38 (60%), Positives = 28/38 (73%)

Query: 1   YDRARGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKPQ 38
           +DR R  EIG K  KL + EE FTT +W+VRIYK+KPQ
Sbjct: 710 FDRVRRTEIGKKYFKLTHFEEVFTTHHWMVRIYKLKPQ 747