Jatropha Genome Database

JcCA0147111.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147111.10 - phase: 0 /partial
         (202 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29669.m000830 anthranilate synthase component I, putative             315   8e-87
29681.m001325 anthranilate synthase component I, putative             254   2e-68

>29669.m000830 anthranilate synthase component I, putative
          Length = 574

 Score =  315 bits (807), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 157/202 (77%), Positives = 169/202 (83%), Gaps = 1/202 (0%)

Query: 1   MQSLTFSLRLSPVPSTTAISTRRRLPTSFSCVRSLKCISHSNPSLVDDEAKFVEAAKHGN 60
           MQSLTFS RLSP P+ T   T   +P + S  R   C+S  N SLV D AKF EAAK GN
Sbjct: 1   MQSLTFSHRLSPFPTATTTKTTV-IPPTRSSFRPGNCMSSLNSSLVSDGAKFTEAAKQGN 59

Query: 61  IVPLRSCIFSDQLTPVTAYRCLVKEDDREAPSFLFETVEPGFQVSRVGRYSVVGAQPAIE 120
           +VPL SCIFSDQLTPVTAYRCLVKEDDREAPSFLFE+VEPG + S VGRYSV+GAQPAIE
Sbjct: 60  LVPLHSCIFSDQLTPVTAYRCLVKEDDREAPSFLFESVEPGSRDSSVGRYSVIGAQPAIE 119

Query: 121 IVAKENKVTIIDHEAGCLTEEFVEDPMTIPRRISESWKPQIISELSEAFCGGWVGYFSYD 180
           IVAKENKVTI+DHE G LTE+F EDPMTIPRRISE WKPQ+ISEL EAFCGGWVGYFSYD
Sbjct: 120 IVAKENKVTIMDHEEGSLTEDFAEDPMTIPRRISEGWKPQLISELPEAFCGGWVGYFSYD 179

Query: 181 TVRYVEKKKLPFSGAPDDDRNL 202
           TVRYVEKKKLPFS AP+DDRNL
Sbjct: 180 TVRYVEKKKLPFSSAPEDDRNL 201


>29681.m001325 anthranilate synthase component I, putative
          Length = 614

 Score =  254 bits (649), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/202 (60%), Positives = 147/202 (72%), Gaps = 11/202 (5%)

Query: 12  PVPSTTAISTRRRLPTSFSC-----------VRSLKCISHSNPSLVDDEAKFVEAAKHGN 60
           P+P +++++   R  TS              V +LKC + ++ +  D  AKF EA+K GN
Sbjct: 40  PLPPSSSVNPNARFCTSILKKSLSLVSSSPRVPTLKCSASTSQAYADQSAKFQEASKKGN 99

Query: 61  IVPLRSCIFSDQLTPVTAYRCLVKEDDREAPSFLFETVEPGFQVSRVGRYSVVGAQPAIE 120
           +VPL  CI  D LTPV AYRCLVKEDDR+APSFLFE+VEPG   S VGRYSV+GAQP++E
Sbjct: 100 LVPLYHCILCDHLTPVLAYRCLVKEDDRDAPSFLFESVEPGSDASTVGRYSVLGAQPSVE 159

Query: 121 IVAKENKVTIIDHEAGCLTEEFVEDPMTIPRRISESWKPQIISELSEAFCGGWVGYFSYD 180
           IVAKEN VTI+DH  G  TEE V+DPM +PR++ ESW PQ++ EL E F GGWVGYFSYD
Sbjct: 160 IVAKENMVTIMDHYEGRRTEEIVDDPMEVPRKMMESWTPQLVDELPEVFSGGWVGYFSYD 219

Query: 181 TVRYVEKKKLPFSGAPDDDRNL 202
           TVRYVEKKKLPF GAP DDRNL
Sbjct: 220 TVRYVEKKKLPFDGAPPDDRNL 241