Jatropha Genome Database

JcCA0147051.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147051.20 + phase: 0 /pseudo
         (273 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29780.m001317 N-acetyl-gamma-glutamyl-phosphate reductase, putative   331   2e-91

>29780.m001317 N-acetyl-gamma-glutamyl-phosphate reductase, putative
          Length = 400

 Score =  331 bits (849), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 181/279 (64%), Positives = 202/279 (72%), Gaps = 23/279 (8%)

Query: 1   MSTSVFNSVYLDGGCLCKGQVKFSTLRKRNEHRQCVVRSAALSTRSLQIRNSKQEKEARV 60
           MSTSVFNSV LD  CL KG+V+FS LRK+ E+R  V RS A S +SLQIRNSKQEK+ RV
Sbjct: 1   MSTSVFNSVCLDRECLWKGEVRFSKLRKQCEYRLYVGRSNA-SRKSLQIRNSKQEKQVRV 59

Query: 61  ALLGASGYTGAEIIRLLANHPFFEISVMTADKNAGKSIESVFPHFISKKDLPVLVSTNDA 120
           ALLGASGYTGAEIIRLLANHPFF I+VMTAD+NAGKSIESVFPH I++KDLPVL+STNDA
Sbjct: 60  ALLGASGYTGAEIIRLLANHPFFGITVMTADRNAGKSIESVFPHLITQKDLPVLISTNDA 119

Query: 121 SFSDVDAVFCCLPHGTTQEIIKGLPRKLKIVDLSAVWFETTIKTDFRLRDISEYEEWYGQ 180
            FSDVDAVFCCLPHGTTQEIIK LP  LK+VDLSA         DFRLRDISEYEEWYGQ
Sbjct: 120 KFSDVDAVFCCLPHGTTQEIIKSLPEGLKVVDLSA---------DFRLRDISEYEEWYGQ 170

Query: 181 SHRAPDLQEEAIYGLTEIFQK--------GNKICTASC*SWLLSNINSTPSCSFTKG*SH 232
            HRAP LQEEAIYGLTEIF++         N  C  +     L  +       +    + 
Sbjct: 171 PHRAPKLQEEAIYGLTEIFREEIKSARLVANPGCYPTSIQLPLVPLIKANLIGYE---NI 227

Query: 233 CI*KYHH*RKVWR--EWSSLYTELTEGIMSYGVTRHRHG 269
            I          R  + ++LYTELTEGIMSYGVTRHRH 
Sbjct: 228 IIDAKSGVSGAGRGAKVANLYTELTEGIMSYGVTRHRHA 266