Jatropha Genome Database

JcCA0147051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147051.10 + phase: 1 /partial
         (133 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29780.m001316 ATP binding protein, putative                           209   3e-55

>29780.m001316 ATP binding protein, putative
          Length = 2970

 Score =  209 bits (531), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 101/134 (75%), Positives = 118/134 (88%), Gaps = 2/134 (1%)

Query: 1    LAHYRSSIGKSPYIDFDGEQQLMNKLKETEDDRVQIAQRLFGLCTSVLKVAGITKPVSNV 60
            LAHYR+SIGKS YI+FD EQQLMNKL ETE+DR +IAQ+L GLCTS+LK AGITKPVSN+
Sbjct: 2833 LAHYRASIGKSSYINFDEEQQLMNKLIETEEDRTRIAQKLLGLCTSILKAAGITKPVSNI 2892

Query: 61   TPAAAEEALEQMKSKLTSLERECQDLTIKNRITTEKNRLLEVMAQASPV-NSRIDENCQ- 118
            +P  AEEALEQMK+++TSLERECQDLT KNRIT E+ RL E+M QASP+ NSR +ENCQ 
Sbjct: 2893 SPVVAEEALEQMKNRITSLERECQDLTFKNRITNERIRLSELMPQASPLSNSRTNENCQT 2952

Query: 119  TPKRSQTSFLSALD 132
            TP+RSQ+SFLSALD
Sbjct: 2953 TPRRSQSSFLSALD 2966