Jatropha Genome Database

JcCA0146871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0146871.10 + phase: 0 
         (156 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30206.m000765 2-dehydro-3-deoxyphosphooctonate aldolase, putative     187   2e-48

>30206.m000765 2-dehydro-3-deoxyphosphooctonate aldolase, putative
          Length = 275

 Score =  187 bits (475), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/107 (88%), Positives = 102/107 (95%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRNLEW+READCPVVAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 169 MFGYNDLIVDPRNLEWLREADCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 228

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARAS 141
           AVAVGVDGIFMEVHDDPL+APVDGPTQWPLRHLE LLEEL AIA +S
Sbjct: 229 AVAVGVDGIFMEVHDDPLSAPVDGPTQWPLRHLEELLEELTAIAVSS 275