Jatropha Genome Database
- JcCA0146861.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0146861.10 - phase: 0
(366 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29496.m000135 zinc finger protein, putative 249 1e-66
30174.m009047 zinc finger protein, putative 225 2e-59
29848.m004493 Salt-tolerance protein, putative 191 3e-49
27506.m000051 zinc finger protein, putative 129 2e-30
30174.m009048 conserved hypothetical protein 102 3e-22
30128.m009041 hypothetical protein 81 8e-16
29647.m002019 hypothetical protein 80 2e-15
30131.m007131 Salt-tolerance protein, putative 76 2e-14
30057.m000083 Salt-tolerance protein, putative 74 1e-13
27894.m000807 zinc finger protein, putative 72 4e-13
30131.m007106 Salt-tolerance protein, putative 71 6e-13
30170.m014128 Salt-tolerance protein, putative 70 2e-12
28207.m000104 transcription factor, putative 66 2e-11
27524.m000294 conserved hypothetical protein 65 5e-11
30199.m000884 hypothetical protein 65 5e-11
29762.m000500 Salt-tolerance protein, putative 64 9e-11
30005.m001282 transcription factor, putative 64 9e-11
29660.m000767 zinc finger protein, putative 64 2e-10
30156.m001737 conserved hypothetical protein 63 3e-10
30131.m007007 transcription factor, putative 61 1e-09
30138.m004044 sensory transduction histidine kinase, putative 60 2e-09
30198.m000843 CIL, putative 57 2e-08
30039.m000233 conserved hypothetical protein 57 2e-08
30008.m000813 conserved hypothetical protein 57 2e-08
30130.m000280 sensory transduction histidine kinase, putative 57 2e-08
29633.m000912 hypothetical protein 56 3e-08
29758.m000642 Two-component response regulator ARR2, putative 55 4e-08
29866.m000621 conserved hypothetical protein 55 4e-08
30156.m001736 DNA binding protein, putative 55 6e-08
30190.m011250 conserved hypothetical protein 54 1e-07
29805.m001503 sensory transduction histidine kinase, putative 53 3e-07
30076.m004450 sensory transduction histidine kinase, putative 52 5e-07
30169.m006339 conserved hypothetical protein 52 6e-07
30169.m006492 conserved hypothetical protein 51 7e-07
>29496.m000135 zinc finger protein, putative
Length = 378
Score = 249 bits (636), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 159/381 (41%), Positives = 206/381 (54%), Gaps = 32/381 (8%)
Query: 1 MLKINSDGYRYLTNWARSCDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVW 60
MLK + G NWAR CD C AA CT+YC ADSAYLC CD +HAAN +A +H RVW
Sbjct: 1 MLKEENTGGGGGNNWARVCDTCRAAACTVYCKADSAYLCATCDARIHAANRVASRHGRVW 60
Query: 61 VCTACENAPAAFTCQPDAAKLCINCDIEIHSANPLAGRHIRVPITPISGLANTSSTTCLE 120
VC ACE APAAF C+ DAA LC CD +IHSANPLA RH RVPI PISG CL
Sbjct: 61 VCEACERAPAAFLCKADAASLCATCDADIHSANPLARRHQRVPIHPISG--------CLH 112
Query: 121 ESQAPLLHTENDAMANKIV---------HELEEDQTDSWXXXXXXXXXXQTN---TGFTY 168
QA + + + E EED+ SW N GF +
Sbjct: 113 GPQAGPVGGGGETTTEDMFMTEDGEDGVGEEEEDEAASWLLLNPVKNGNSQNNGTNGFLF 172
Query: 169 IEDVDQYLNHIKYNSCTNYHCQDQINQQQLS-SAHRGDICGDSIVPVQSFXXXXXXXXXX 227
+V++YL+ +YNS + Q N Q S + H+ GDS+VPV+
Sbjct: 173 GGEVEEYLDLFEYNSNSCGENQYADNHQHYSGTVHQKSHEGDSVVPVRCGDGAGKDHVHQ 232
Query: 228 XXXXXXTTFIDSGYGASKASFVNTTSNSQKLHFQNQVPLSFTNAGYL--LTSSNVPNSYS 285
+ + +SKA++ S S + V +S + G + T S S+
Sbjct: 233 QYHNFQ---LGLEFESSKAAYSYNGSIS------HSVSISPMDVGVVPDSTMSEASISHP 283
Query: 286 RFSKRTGDLLPNPSLLVPVQFTPMNREAKVLRYREKRRARKFEKQIRYVTRKANAENRPR 345
R K T DL P + +P Q +P +REA+VLRYREK++ RKFEK IRY +RKA AE RPR
Sbjct: 284 RPPKGTIDLFSGPPIQMPSQLSPRDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPR 343
Query: 346 VKGRFARKKDMELELDQMFPT 366
+KGRFA++ D+E+E+DQ+F T
Sbjct: 344 IKGRFAKRTDVEVEVDQIFST 364
>30174.m009047 zinc finger protein, putative
Length = 177
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 130/183 (71%), Gaps = 8/183 (4%)
Query: 1 MLKINSDGYRYLTNWARSCDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVW 60
MLK N G SCD+C APCTLYCH DSAYLC NCDE++HA N LAL+H RVW
Sbjct: 1 MLKGNPQG--------DSCDSCHTAPCTLYCHTDSAYLCQNCDEFIHATNPLALQHDRVW 52
Query: 61 VCTACENAPAAFTCQPDAAKLCINCDIEIHSANPLAGRHIRVPITPISGLANTSSTTCLE 120
+C ACENAPA FTCQ DAA LCINCD EIH ANPL RH RVPI+P G+ TSSTT L+
Sbjct: 53 ICIACENAPATFTCQADAANLCINCDTEIHLANPLPCRHNRVPISPPPGIVPTSSTTYLD 112
Query: 121 ESQAPLLHTENDAMANKIVHELEEDQTDSWXXXXXXXXXXQTNTGFTYIEDVDQYLNHIK 180
+SQ PL TEN+AMANK + ELE+D+ DSW Q+++GF Y EDVD+YL+ I+
Sbjct: 113 KSQVPLRDTENEAMANKSIEELEQDEADSWLLLDLDNNDDQSDSGFPYSEDVDEYLDLIE 172
Query: 181 YNS 183
NS
Sbjct: 173 LNS 175
>29848.m004493 Salt-tolerance protein, putative
Length = 332
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 179/356 (50%), Gaps = 54/356 (15%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWVCTACENAPAAFTCQPDA 78
CD+C +A TL+C DSA+LC NCD +HAAN LA +H RV +C CE APA TC+ DA
Sbjct: 6 CDSCKSATATLFCRPDSAFLCINCDSKIHAANKLASRHARVLICEVCEQAPAHVTCKADA 65
Query: 79 AKLCINCDIEIHSANPLAGRHIRVPITP----ISGLANTSSTTCLEESQAPLLHTENDAM 134
A LC+ CD +IHSANPLA RH RVPITP +S + N + L + + ++ D
Sbjct: 66 AALCVTCDRDIHSANPLARRHERVPITPFYDSVSSVNNKPNAVNLLDDR---YFSDVDGD 122
Query: 135 ANKIVHELEEDQTDSWXX----XXXXXXXXQTNTGFTYIEDVDQYLNHIKYNSCTNYHCQ 190
A + EE + SW NTG D+D YL+ +Y
Sbjct: 123 AADVSR--EEAEAASWLLPNPPNTKLVENSDPNTGQYVFSDMDPYLD-------LDYGPG 173
Query: 191 DQINQQQLSSAHRGDICGDSIVPVQSFXXXXXXXXXXXXXXXXTTFIDSGYGASKASFVN 250
D +L + + D +VPV+S +A FVN
Sbjct: 174 D----PKLEAQEQNSSGTDGVVPVKSSKNV------------------------QAPFVN 205
Query: 251 TTSNSQKLHFQNQVPLSFTNAGYLLTSSNVPNSYSRFSKRTGDLLPNP---SLLVPV-QF 306
N +L F P + L++S +S G + NP S + V Q
Sbjct: 206 --DNCFELDFTGSKPFPYGYNAQCLSNSVSSSSLDVGVVPDGGDISNPYSKSTMESVQQL 263
Query: 307 TPMNREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARKKDMELELDQ 362
+ ++REA+VLRYREKR+ RKFEK IRY +RKA AE RPR+KGRFA++ D+++E D+
Sbjct: 264 SAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIDVEADR 319
>27506.m000051 zinc finger protein, putative
Length = 388
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 5/154 (3%)
Query: 2 LKINSDGYRYLTN-W---ARSCDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHK 57
+ I + + LT W AR CD+C A ++C ADSA+LC NCD +HAAN L +H+
Sbjct: 1 MGIEMESLKSLTGGWTVAARRCDSCKTAAAAVFCRADSAFLCLNCDAKIHAANKLVSRHE 60
Query: 58 RVWVCTACENAPAAFTCQPDAAKLCINCDIEIHSANPLAGRHIRVPITPISGLANTSSTT 117
RVW+C CE APAA TC+ DAA LC+ CD +IHSANPLA RH RVP+ P A + +
Sbjct: 61 RVWMCEVCEQAPAAVTCKADAAALCVTCDADIHSANPLARRHERVPVEPFFDSAGSIVKS 120
Query: 118 CLEESQAPLLHTENDAMA-NKIVHELEEDQTDSW 150
P H + A N HE ++ + SW
Sbjct: 121 SPFNFLVPTDHNGAGSAAFNHQQHEDDDVEGVSW 154
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 50/60 (83%)
Query: 305 QFTPMNREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARKKDMELELDQMF 364
Q +NREA+VLRYREKR+ RKFEK IRY +RKA AE RPR+KGRFA++ +++ ++D+++
Sbjct: 309 QMCGINREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDTDMDRLY 368
>30174.m009048 conserved hypothetical protein
Length = 125
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 79/123 (64%), Gaps = 9/123 (7%)
Query: 200 SAHRGDICGDSIVPVQSFXXXXXXXXXXXXXXXXTTFIDSGYGASKASFVNTTSNSQKLH 259
S H+GD DS+VPVQS F+DSGY AS+A+F N+TS+ K
Sbjct: 8 SVHQGDNGSDSVVPVQSLESKDQRDHHHQQQ---NLFVDSGYEASEAAFTNSTSSGHK-- 62
Query: 260 FQNQVPLSFTNAGYLLTSSNVPNSYSRFSKRTGDLLPNPSLLVPVQFTPMNREAKVLRYR 319
VP S+ ++G+LL ++N+PNSYSRF DLL + SLL+P+QF+P NREA+VLRYR
Sbjct: 63 ----VPASYMSSGHLLRTNNIPNSYSRFPNVATDLLSSSSLLMPLQFSPTNREARVLRYR 118
Query: 320 EKR 322
EK+
Sbjct: 119 EKK 121
>30128.m009041 hypothetical protein
Length = 477
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWVCTACENAPAAFTCQPDA 78
CD C LYC ADSA LC CD++VH+AN L+ KH R +C C P C D
Sbjct: 14 CDFCSEQIAVLYCRADSAKLCLFCDQHVHSANLLSRKHVRSQICDNCSKGPVTVRCGTDN 73
Query: 79 AKLCINCDIEIHSANPLAGRHIRVPITPISG 109
LC CD + H + ++ H R P+ +SG
Sbjct: 74 LVLCQECDWDAHGSCSVSASHDRTPVEGLSG 104
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 310 NREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARKKD 355
NR + Y+EKR+ R+++K IRY +RKA A+ R RVKGRF + D
Sbjct: 428 NRGIAMQHYKEKRKNRRYDKHIRYESRKARADTRKRVKGRFVKASD 473
>29647.m002019 hypothetical protein
Length = 411
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 17 RSCDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWVCTACENAPAAFTCQP 76
R CD C LYC ADSA LC +CD VH+ N L KH R +C +C+ +PA+ C+
Sbjct: 24 RLCDYCNDTTALLYCRADSAKLCISCDREVHSTNQLFSKHTRSLLCDSCDASPASIFCET 83
Query: 77 DAAKLCINCDIEIHSANPLAGRHIRVPITPISGLANTS 114
+ + C NCD E H+ + L+ H R PI SG + S
Sbjct: 84 EHSVFCQNCDWEKHNLS-LSSVHNRRPIEGFSGFPSVS 120
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 35/42 (83%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFAR 352
R++ + RY+EKR+ R+++K IRY +RKA AE+R R++GRFA+
Sbjct: 367 RDSAISRYKEKRKTRRYDKHIRYESRKARAESRTRIRGRFAK 408
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 56 HKRVWVCTACENAPAAFTCQPDAAKLCINCDIEIHSANPLAGRHIR 101
H++ +C C + A C+ D+AKLCI+CD E+HS N L +H R
Sbjct: 20 HQQERLCDYCNDTTALLYCRADSAKLCISCDREVHSTNQLFSKHTR 65
>30131.m007131 Salt-tolerance protein, putative
Length = 212
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWV--------CTACENAPA 70
CD C +A L+C AD A LC +CDE VH N LA +H RV + C CEN PA
Sbjct: 5 CDVCESAAAILFCAADEAALCRSCDEKVHLCNKLASRHVRVGLADPSEVPRCDICENEPA 64
Query: 71 AFTCQPDAAKLCINCDIEIH 90
F C+ D + LC+ CD+ +H
Sbjct: 65 FFYCEIDGSSLCLQCDMIVH 84
>30057.m000083 Salt-tolerance protein, putative
Length = 238
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWV---------CTACENAP 69
CD C AP T+ C AD A LC CD VHAAN LA KH+R+ + C C+
Sbjct: 5 CDVCERAPATVICCADEAALCAKCDIEVHAANKLASKHQRLLLNCLSNKLPPCDICQEKA 64
Query: 70 AAFTCQPDAAKLCINCDIEIHSANPLAGRHIRVPITPISGLANTSST-----TCLE 120
A C D A C +CD IHSA L+ H R T I +S T +CLE
Sbjct: 65 AFIFCVEDRALFCQDCDEPIHSAGSLSANHQRFLATGIRVAVGSSCTKDTKKSCLE 120
>27894.m000807 zinc finger protein, putative
Length = 290
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWV---------CTACENAP 69
C+ C AA + C AD A LC CDE VHAAN LA KH+RV + C C+
Sbjct: 5 CNVCEAAEANVLCCADEAALCWGCDEKVHAANKLASKHQRVPLSTSSSHIPNCDICQETA 64
Query: 70 AAFTCQPDAAKLCINCDIEIHSANPLAGRHIRVPITPI 107
F C D A LC CD+ IH+AN H R +T +
Sbjct: 65 GFFFCLEDRALLCRKCDVAIHTANAYVSGHQRFLLTGV 102
>30131.m007106 Salt-tolerance protein, putative
Length = 226
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVW----------VCTACENA 68
CD C + +++C AD A LC CD +VH AN LA KH R +C C+
Sbjct: 5 CDVCDKSEASVFCSADEAALCEACDRHVHHANKLASKHHRFSLLRTSSKQSPLCDICQER 64
Query: 69 PAAFTCQPDAAKLCINCDIEIHSANPLAGRHIRVPITPI 107
A CQ D A LC CDI IH AN +H R +T I
Sbjct: 65 RAFLFCQEDRAILCRECDIPIHKANEHTKKHNRFLLTGI 103
>30170.m014128 Salt-tolerance protein, putative
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVW----------VCTACENA 68
CD C +++C AD A LC+ CD VH AN LA KH R +C C+
Sbjct: 5 CDVCSKEEASVFCTADEAALCDACDHSVHHANKLASKHHRFCLLHPSSKSFPICDVCQEK 64
Query: 69 PAAFTCQPDAAKLCINCDIEIHSANPLAGRHIRVPITPI 107
A CQ D A LC +CD+ IH AN +H R +T +
Sbjct: 65 RAFVFCQQDRAILCRDCDVPIHKANEHTQKHNRFLLTGV 103
>28207.m000104 transcription factor, putative
Length = 430
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARK 353
REA+VLRY+EKRR R F K+IRY RK NAE RPR+KGRF ++
Sbjct: 375 REARVLRYKEKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 417
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 16 ARSCDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWVCTA 64
AR+CD C +C AD A+LC CD+ VH+AN LA +H+RV + TA
Sbjct: 16 ARACDGCSRKRARWFCAADDAFLCQACDDSVHSANQLASRHERVRLETA 64
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 48 AANSLALKHKRVWVCTACENAPAAFTCQPDAAKLCINCDIEIHSANPLAGRHIRVPI--- 104
AAN+L+ K R C C A + C D A LC CD +HSAN LA RH RV +
Sbjct: 7 AANALSGKTARA--CDGCSRKRARWFCAADDAFLCQACDDSVHSANQLASRHERVRLETA 64
Query: 105 -TPISGLANT 113
+ ISG NT
Sbjct: 65 SSKISGSRNT 74
>27524.m000294 conserved hypothetical protein
Length = 468
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 310 NREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARK 353
REA+V RYREKRR R F K+IRY RK NAE RPR+KGRF ++
Sbjct: 410 GREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 453
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 16 ARSCDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRV 59
AR+CD+C YC AD A+LC +CD VH+AN LA +H+RV
Sbjct: 16 ARACDSCVRKRARWYCAADDAFLCQSCDSSVHSANPLARRHERV 59
>30199.m000884 hypothetical protein
Length = 58
Score = 65.1 bits (157), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 309 MNREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARK 353
+ REA VLRY+EKR+ R F K+IRY RK NA+ RPR+KGRF ++
Sbjct: 12 IRREASVLRYKEKRQTRLFSKKIRYQVRKLNADKRPRLKGRFIKR 56
>29762.m000500 Salt-tolerance protein, putative
Length = 204
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWV--------CTACENAPA 70
CD C +A ++C AD A LC CDE VH N LA +H RV + C CENAPA
Sbjct: 5 CDNCESAAAAVFCAADEAALCGACDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
Query: 71 AFTCQPDAAKLCINCDIEIH 90
F C+ D + LC+ CD+ +H
Sbjct: 65 FFYCEVDGSSLCLQCDVTVH 84
>30005.m001282 transcription factor, putative
Length = 414
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWVCTACENAPAAFTCQPDA 78
CD C +YC +D+A LC +CD VH+AN+L+ +H R +C C + PA C +
Sbjct: 5 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALIRCADER 64
Query: 79 AKLCINCDIEIHSANPLAGRHIRVPITPISGLANTSSTTCL 119
LC CD +H + + H R I +G + S + L
Sbjct: 65 LSLCQKCDWMVHGNSNSSSTHKRQTINCYTGCPSASELSSL 105
>29660.m000767 zinc finger protein, putative
Length = 178
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWVCTACENAPAAFTCQPDA 78
C+ C A +YC AD+AYLC +CD VH+AN+L+ +H R +C +C + PA C
Sbjct: 5 CEFCTALRPIIYCKADAAYLCLSCDAKVHSANALSNRHLRTLLCDSCRDRPAYARCLNHR 64
Query: 79 AKLCINCDIEIHSAN 93
+C CD IH +
Sbjct: 65 MFVCCGCDQRIHGVS 79
>30156.m001737 conserved hypothetical protein
Length = 419
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 19 CDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWVCTACENAPAAFTCQPDA 78
C+ C +YC +DSA LC +CD +VHAANSL+ +H R +C C + PA C +
Sbjct: 32 CEFCGVVRAVVYCKSDSARLCLHCDGFVHAANSLSRRHPRSLLCDKCNSQPAILRCLDER 91
Query: 79 AKLCINCDIEIHSANPLAGRHIRVPITPISG 109
+C CD ++ H P+T +G
Sbjct: 92 LSVCQICDWNANANGCSNLGHQHQPLTCYTG 122
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 308 PMNREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFAR 352
P R+ +RY EK++ R F KQIRY +RKA A+ R RVKGRF +
Sbjct: 358 PQARDKAKMRYNEKKKTRTFSKQIRYASRKARADTRKRVKGRFVK 402
>30131.m007007 transcription factor, putative
Length = 426
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 15 WARSCDACCAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWVCTACENAPAAFTC 74
+ R CD C + LYC ADSA LC CD+ VH+AN+L+L H R C C PA+ C
Sbjct: 14 FVRLCDFCNSEAAILYCRADSAKLCLFCDQQVHSANALSLNHFRSLNCDKCGAEPASVQC 73
Query: 75 Q------PDAAKLCINCDIEIHSANPLAGR-HI 100
+ LC +CD + + L R HI
Sbjct: 74 SVINDNNNNDLVLCQDCDFDCSVSLSLLKRAHI 106
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 304 VQFTPMNREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFAR 352
V+ NR +LRY EK++ R+++K IRY +RKA A+ R RVKGRF +
Sbjct: 373 VELFAQNRGNAMLRYMEKKKTRRYDKHIRYESRKARADTRERVKGRFVK 421
>30138.m004044 sensory transduction histidine kinase, putative
Length = 550
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARK 353
REA ++++R+KR+ R F+K+IRYV RK AE RPRV+G+F RK
Sbjct: 467 REAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRK 509
>30198.m000843 CIL, putative
Length = 397
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 29/37 (78%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVK 347
REA VLRY+EKRR R F K+IRY RK NA+ RPR+K
Sbjct: 357 REASVLRYKEKRRTRLFSKKIRYQVRKVNADQRPRMK 393
>30039.m000233 conserved hypothetical protein
Length = 140
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 305 QFTPMNREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARKKDME 357
+++P ++ ++ RYR KR R F K+I+Y RK A++RPR++GRFAR ++E
Sbjct: 52 KYSPEEKKERIERYRSKRTQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIE 104
>30008.m000813 conserved hypothetical protein
Length = 428
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARKKDM 356
R+ K+ RY +KR R F K+I+Y RK A++RPRV+GRFA+ D
Sbjct: 330 RKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDF 375
>30130.m000280 sensory transduction histidine kinase, putative
Length = 807
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 34/43 (79%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARK 353
REA + ++R+KR+ R FEK++RY +RK AE RPRVKG+F R+
Sbjct: 708 REAALSKFRQKRKERCFEKRVRYQSRKRLAEQRPRVKGQFVRQ 750
>29633.m000912 hypothetical protein
Length = 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVK 347
REA VLRY+EKR++R F K+IRY RK NAE RPR+K
Sbjct: 235 REASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRLK 271
>29758.m000642 Two-component response regulator ARR2, putative
Length = 659
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 34/43 (79%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARK 353
REA + ++R+KR+ R FEK++RY +RK AE RPRV+G+F R+
Sbjct: 605 REAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQ 647
>29866.m000621 conserved hypothetical protein
Length = 667
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 309 MNREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARKKDMELELDQ 362
+ REA + ++R KR+ R +EK++RY +RK AE RPRVKG+F R+ E DQ
Sbjct: 614 IQREAALNKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQAHPSAETDQ 667
>30156.m001736 DNA binding protein, putative
Length = 131
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 23 CAAPCTLYCHADSAYLCNNCDEYVHAANSLALKHKRVWVCTACEN 67
C + +LYC AD A+LC CD++VH AN LA +H R ++C C+N
Sbjct: 38 CGSRASLYCQADDAFLCRKCDKWVHGANFLANRHIRCFLCNTCQN 82
>30190.m011250 conserved hypothetical protein
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARKKD 355
R+ ++ +YR KR R F K I+Y RK A+NRPR++GRFAR +
Sbjct: 251 RKDRISKYRAKRNQRNFTKTIKYACRKTLADNRPRIRGRFARNDE 295
>29805.m001503 sensory transduction histidine kinase, putative
Length = 762
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARK 353
RE + ++R+KR+ R F K++RY +RK AE RPRV+G+F R+
Sbjct: 708 REVALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQ 750
>30076.m004450 sensory transduction histidine kinase, putative
Length = 697
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 311 REAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARK 353
REA + ++R KR+ R +EK++RY +RK AE RPRVKG+F R+
Sbjct: 641 REAALTKFRLKRKDRCYEKKVRYQSRKRLAELRPRVKGQFVRQ 683
>30169.m006339 conserved hypothetical protein
Length = 277
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 305 QFTPMNREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARKKDM 356
++T R+ ++LRY +KR R F K I+Y RK A+ R RV+GRFAR ++
Sbjct: 175 RYTVEERKDRILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNEL 226
>30169.m006492 conserved hypothetical protein
Length = 283
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 310 NREAKVLRYREKRRARKFEKQIRYVTRKANAENRPRVKGRFARKKD 355
R K+ RYR K+ R F ++I+Y RKA A+++PRV+GRFA+ +D
Sbjct: 231 GRMEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKTED 276