Jatropha Genome Database

JcCA0146411.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0146411.20 - phase: 0 
         (618 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29708.m000185 ETHYLENE-INSENSITIVE3 protein, putative                1024   0.0  
30169.m006395 ETHYLENE-INSENSITIVE3 protein, putative                 339   2e-93
29713.m000181 transcription factor, putative                          295   5e-80
29713.m000180 transcription factor, putative                          218   7e-57

>29708.m000185 ETHYLENE-INSENSITIVE3 protein, putative
          Length = 617

 Score = 1024 bits (2647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/624 (81%), Positives = 541/624 (86%), Gaps = 14/624 (2%)

Query: 1   MMFDEMGFCSDMDFFSAPFGEDVAAPQAEPEPTVEDDYSDEETDVDELERRMWRDKMRLK 60
           MMFDE+GFC DMDFFS+  GEDVAA QAE EPTVEDDYSDEE DVDELERRMWRDKMRLK
Sbjct: 2   MMFDEIGFCGDMDFFSSSLGEDVAAQQAEHEPTVEDDYSDEEIDVDELERRMWRDKMRLK 61

Query: 61  RLKEQNKSKEGIDIAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEK 120
           +LKEQNKSKEGID+AKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEK
Sbjct: 62  KLKEQNKSKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEK 121

Query: 121 GKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSIPGKNEDCNSIGPTPHTLQELQD 180
           GKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSIPGKNE CNSIGPTPHTLQELQD
Sbjct: 122 GKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSIPGKNEGCNSIGPTPHTLQELQD 181

Query: 181 TTLGSLLSALMQHCDPPQRRFPLEKGVXXXXXXXXXXXXXXQLGLPKDQGPPPYKKPHDL 240
           TTLGSLLSALMQHCDPPQRRFPLEKGV              QLGLPKDQGPPPYKKPHDL
Sbjct: 182 TTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGNEEWWPQLGLPKDQGPPPYKKPHDL 241

Query: 241 KKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELY 300
           KKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELY
Sbjct: 242 KKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELY 301

Query: 301 PDSCPPLXXXXXXXXLVIHDCSEYDVEGVENEPNFDVQECKPENLNSN-LGMERMRERLP 359
           PDSCPPL        L+IHDCSEYDVEG+E+EPNFDVQECKPE+LNS+ LGMERMRERLP
Sbjct: 302 PDSCPPL-SSAGSGSLIIHDCSEYDVEGIEDEPNFDVQECKPEHLNSSGLGMERMRERLP 360

Query: 360 LRQPSYPIKGEIVTNVDFIRKRKPPSDIDMMVDQKIYTCEFVQCPYSQLRLGFNDRASRD 419
           LRQPSYPIKGE+++ VDFIRKRKP SDI+MMVDQK+YTCEFVQCPYSQLRLGF+DR SRD
Sbjct: 361 LRQPSYPIKGELISTVDFIRKRKPSSDINMMVDQKVYTCEFVQCPYSQLRLGFHDRTSRD 420

Query: 420 NHQLNCPYR-CSLDFGGSNFHCNEVKPVIFP----HPKPAPLMVNAAPPTFDLSGVPEDG 474
           NHQL CPYR  SL+FGGSNFH NEVKPVIFP     PKPA  MVN APP FDLSGVPEDG
Sbjct: 421 NHQLTCPYRSSSLEFGGSNFHVNEVKPVIFPQPCAQPKPAASMVNNAPPAFDLSGVPEDG 480

Query: 475 QKMISELMSIYDTXXXXXXXXXXXXXXXXXXESHSLFQPKIHHHHQPDNYFRGQANVIEG 534
           QKMISELMSIYDT                  E H+LFQPKI  HHQ DNYFR Q+NV++ 
Sbjct: 481 QKMISELMSIYDT----NVQGNKNSGNNQVTEGHNLFQPKI--HHQQDNYFRSQSNVMDA 534

Query: 535 NIFEESNIHNNHQMFSQDSNQFERFKALNSPFESNHHPTAAATNNSSFKFGSPFDLASFD 594
           NIFE+SNIHNNHQMFSQD +QF+RFKALNSPFES++       ++ +  FGSPFDL+SFD
Sbjct: 535 NIFEDSNIHNNHQMFSQDGSQFDRFKALNSPFESSNQ-HNNNNSSFNLMFGSPFDLSSFD 593

Query: 595 YKEDLQGLVMDALPKQQDVSIWFQ 618
           YKEDLQGL M++LPKQQD +IWFQ
Sbjct: 594 YKEDLQGLAMESLPKQQDAAIWFQ 617


>30169.m006395 ETHYLENE-INSENSITIVE3 protein, putative
          Length = 631

 Score =  339 bits (869), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 183/311 (58%), Positives = 229/311 (73%), Gaps = 20/311 (6%)

Query: 34  VEDDYSDEETDVDELERRMWRDKMRLKRLKEQNK--SKEGIDIAKQRQSQEQARRKKMSR 91
            E D SDEE + +ELERRMW+D+++LKR+KE+ K  +++  +  K +Q+ +QARRKKMSR
Sbjct: 41  TEKDVSDEEIESEELERRMWKDRIKLKRIKERQKLAAQQAAEKQKPKQTSDQARRKKMSR 100

Query: 92  AQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAK 151
           AQDGILKYMLK+MEVCKA+GFVYGIIPEKGKPV+GASDN+R WWK+KV+FD+NGPAAIAK
Sbjct: 101 AQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAK 160

Query: 152 YQA-----DNSIPGKNEDCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKG 206
           Y+A     D +  G+N +  S+      LQ+LQD TLGSLLS+LMQHCDPPQR++PLEKG
Sbjct: 161 YEAECLAMDEAEKGRNGNSQSV------LQDLQDATLGSLLSSLMQHCDPPQRKYPLEKG 214

Query: 207 VXXXXXXXXXXXXXXQLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKL 266
           V              +LGLP+ Q  P YKKPHDLKK WKVGVLTAVIKHMSPD AKIR+ 
Sbjct: 215 VPPPWWPTGNEEWWVKLGLPQGQS-PLYKKPHDLKKMWKVGVLTAVIKHMSPDTAKIRRH 273

Query: 267 VRQSKCLQDKMTAKESATWLAIINQEEALARELYPDSCP------PLXXXXXXXXLVIHD 320
           VRQSKCLQDKMTAKESA WL+++N+EE+L ++   D+        P           I  
Sbjct: 274 VRQSKCLQDKMTAKESAIWLSVLNREESLIQQPSSDNGTSGITEMPQGRCVGKKRPAISS 333

Query: 321 CSEYDVEGVEN 331
            S+YDV+ V++
Sbjct: 334 DSDYDVDAVDD 344


>29713.m000181 transcription factor, putative
          Length = 476

 Score =  295 bits (754), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 146/248 (58%), Positives = 186/248 (75%), Gaps = 9/248 (3%)

Query: 48  LERRMWRDKMRLKRLKEQNKSKEGIDIAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVC 107
           L++RMW+D+MR+++LKE+  S+E   +AK+    E +RRKKMSRAQD ILKYM+K+MEVC
Sbjct: 27  LKKRMWKDRMRMQKLKEKCASEEPESVAKE----EASRRKKMSRAQDSILKYMVKIMEVC 82

Query: 108 KAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSIPGKNEDCNS 167
           KAQGFVYGII EKGKPVTG+SD+LR+WWK+K RFD+  P A+ ++     +P   +D   
Sbjct: 83  KAQGFVYGIISEKGKPVTGSSDSLRQWWKEKARFDQEAPQALEEF-----LPSLAQDEFD 137

Query: 168 IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVXXXXXXXXXXXXXXQLGLPK 227
              + H LQ+LQD+TLGSLLSALMQ C PPQRRFPLE+G+              + G  +
Sbjct: 138 SVSSMHLLQDLQDSTLGSLLSALMQRCVPPQRRFPLERGLAPPWWPTGNEIWWGEQGPSR 197

Query: 228 DQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLA 287
           + G PPYKKPHDLKKAWK+ VL AVIKH+SP+  ++R+LV QSKCLQ KMTAKESATW  
Sbjct: 198 EHGIPPYKKPHDLKKAWKLSVLAAVIKHLSPNFDRMRRLVTQSKCLQAKMTAKESATWSK 257

Query: 288 IINQEEAL 295
           ++NQEEAL
Sbjct: 258 VVNQEEAL 265


>29713.m000180 transcription factor, putative
          Length = 398

 Score =  218 bits (555), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 110/205 (53%), Positives = 138/205 (67%), Gaps = 14/205 (6%)

Query: 104 MEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQA---DNSIPG 160
           ME CKAQGFVYGI+P+KGKP+TG+SD+LR+WWK++ +FD+  P AI K+     D   P 
Sbjct: 1   MEACKAQGFVYGIVPDKGKPITGSSDSLRQWWKEEAQFDQKAPVAIGKFLVLPQDELFP- 59

Query: 161 KNEDCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVXXXXXXXXXXXXX 220
               C  +      L +L +TTL SLL+ALMQ C PPQRR+PLEKG+             
Sbjct: 60  --VSCMQL------LDDLHNTTLRSLLAALMQRCIPPQRRYPLEKGLAPPWWPTGNETWW 111

Query: 221 XQLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAK 280
            + GL +  G PPYKKPH+LKKAWKV VL AVIKH++P    IR+LV +SKCLQ KMTAK
Sbjct: 112 GEQGLSRQHGAPPYKKPHNLKKAWKVSVLAAVIKHIAPSFDIIRRLVTRSKCLQAKMTAK 171

Query: 281 ESATWLAIINQEEALARELYPDSCP 305
           ES TW  +IN+EEAL R    ++CP
Sbjct: 172 ESTTWSKVINREEALFR--LSETCP 194