Jatropha Genome Database

JcCA0145861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0145861.10 - phase: 0 
         (418 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29726.m003992 conserved hypothetical protein                          479   e-135
29263.m000092 conserved hypothetical protein                           64   1e-10
29851.m002456 NAD dependent epimerase/dehydratase, putative            58   8e-09

>29726.m003992 conserved hypothetical protein
          Length = 343

 Score =  479 bits (1233), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/253 (90%), Positives = 242/253 (95%)

Query: 166 SCLASRSGGIKDSWKIDYEATKNSLVAGRNNGANHFVLLSAICVQKPLLEFQRAKLKFEA 225
           S  +SR+GG+KDSWKIDYEATKNSL+AGR  GA HFVLLSAICVQKPLLEFQRAKLKFEA
Sbjct: 91  SIKSSRTGGVKDSWKIDYEATKNSLIAGRKFGAQHFVLLSAICVQKPLLEFQRAKLKFEA 150

Query: 226 DLMKEAEEDNGFSYSIVRPTAFFKSLGGQVELVKDGKPYVMFGDGKLCACKPISESDLAS 285
           +LMKE+E DNGF+YSIVRPTAFFKSLGGQ+ELVKDGKPYVMFGDGKLCACKPISE DLAS
Sbjct: 151 ELMKESENDNGFTYSIVRPTAFFKSLGGQIELVKDGKPYVMFGDGKLCACKPISEPDLAS 210

Query: 286 FIADCVLSEDKINKVLPIGGPGKALTSLEQGEMLFRLLGKEPKFLKVPIGIMDFAIGILD 345
           FIADCVLSEDKIN+VLPIGGPGKALT LEQGEMLF+LLGKEPKFLKVPIGIMDFAIGILD
Sbjct: 211 FIADCVLSEDKINQVLPIGGPGKALTPLEQGEMLFKLLGKEPKFLKVPIGIMDFAIGILD 270

Query: 346 FLANIFPSMEDAAEFGKIGRYYAAESMLVLDSETGDYSAEKTPSYGKDTLEEFFERVLRD 405
           FL  IFPSMEDAAEFGKIGRYYAAESML+LD ETGDYSAEKTPSYGKDTLEEFFERVLR+
Sbjct: 271 FLVQIFPSMEDAAEFGKIGRYYAAESMLILDPETGDYSAEKTPSYGKDTLEEFFERVLRE 330

Query: 406 GMAGQELGEQTIF 418
           GMAGQELGEQTIF
Sbjct: 331 GMAGQELGEQTIF 343


>29263.m000092 conserved hypothetical protein
          Length = 404

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 119/271 (43%), Gaps = 33/271 (12%)

Query: 83  KDINILVAGSTGYIGKFVVKELVNRGFNVIAIARERSGIRGKNSKEDTLNDLQGANVCFS 142
           +  +ILV G TG +G+ +V+  ++ G++V      R  +R + +  D L D  GA V  +
Sbjct: 87  RPTSILVVGPTGTLGRQIVRRALDEGYDV------RCLVRPRPAPADFLRDW-GATVVNA 139

Query: 143 DVTNLDILDKSLNDLGVSIDVVVSCLASR-SGGIKDSWKIDYEATKNSLVAGRNNGANHF 201
           D++  + +  +L    V I  ++ C   R    IK    +D+E     +   +  G   +
Sbjct: 140 DLSKPETIPATL----VGIHTIIDCATGRPEEPIK---TVDWEGKVALIQCAKAMGIQKY 192

Query: 202 VLLSAICVQK----PLLEFQRAKLKFEADLMKEAEEDNGFSYSIVRPTAFFKSLGGQ--V 255
           V  S     K    PL+E +    KF         +D+G ++ I+R   F + L GQ  V
Sbjct: 193 VFYSIHNCDKHPEVPLMEIKYCTEKFL--------KDSGINHVIIRLCGFMQGLIGQYAV 244

Query: 256 ELVKDGKPYVMFGDGKLCACKPISESDLASFIADCVLSEDKINKVLPIGGPGKALTSLEQ 315
            ++++     ++G         +   D+A      + +E+   K+L   GP +A T+ E 
Sbjct: 245 PILEEKS---VWGTDAPTRIAYMDTQDIARLTFIALRNENVNGKLLTFAGP-RAWTTQEV 300

Query: 316 GEMLFRLLGKEPKFLKVPIGIMDFAIGILDF 346
             +  RL G++     VP+ I+ F   +  F
Sbjct: 301 ITLCERLAGQDANVTTVPVSILRFTRQLTRF 331


>29851.m002456 NAD dependent epimerase/dehydratase, putative
          Length = 584

 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 31/183 (16%)

Query: 83  KDINI-LVAGSTGYIGKFVVKELVNRGFNVIAIARERSGIRGKNSKEDTLN-------DL 134
           KD N+  VAG+TG +G   V+EL+  GF V      R+G+R     +  +        D 
Sbjct: 78  KDDNLAFVAGATGRVGSRTVRELLKLGFQV------RAGVRSAQRAQTLVQSVKQMKLDG 131

Query: 135 QGANVCFS-DVTNLDILDKSLNDLGVSI---DVVVSCLASRSGGIKD---SWKIDYEATK 187
           +GA      ++   D LDK  N++G ++    +V+ C+ +    + D    ++IDY+AT+
Sbjct: 132 EGAQPIEKFEIIECD-LDKP-NEIGAALGNASIVICCIGAGEKEVFDFTGPYRIDYQATR 189

Query: 188 NSLVAGRNNGANHFVLLSAICVQKPLLEFQRAKLKFEADLM---KEAEE---DNGFSYSI 241
           N + A       HF+++S++   K  + F  A L     ++   ++AEE    +G  Y+I
Sbjct: 190 NLIDAATVAKVKHFIMVSSLGTNK--VGFPAAILNLFWGVLFWKRKAEEALIASGIPYTI 247

Query: 242 VRP 244
           VRP
Sbjct: 248 VRP 250