Jatropha Genome Database

JcCA0145571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0145571.10 - phase: 0 /partial
         (350 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004623 sphingosine phosphate lyase, putative                   551   e-157

>29929.m004623 sphingosine phosphate lyase, putative
          Length = 541

 Score =  551 bits (1421), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 272/321 (84%), Positives = 293/321 (91%)

Query: 30  MALVKSILREFRVSANSFLSEYEPLDLLIAPFLTFLLARILRSFLRVIYENGLKATVLGF 89
           M  VK +L +FRV+ANSFLSEYEPL L++AP LT LLARIL S  RV YENGLK+T+ GF
Sbjct: 3   MDSVKELLIQFRVTANSFLSEYEPLALVLAPLLTLLLARILHSLFRVFYENGLKSTLFGF 62

Query: 90  FMSFIKLVPGVKSYIDAEKQKVVDQLQSGTKSKRESWRSELPREGLGTRVIEEMKEEKRN 149
            M+ IKLVPGVKSYIDAEKQKVVD+LQSG+KSKRE WR ELP EGLGT +IE+MKEEKRN
Sbjct: 63  LMASIKLVPGVKSYIDAEKQKVVDKLQSGSKSKREGWRVELPMEGLGTEIIEKMKEEKRN 122

Query: 150 DVVWQGKCSGTVYIGGSESEGHFALINEACSMFAHTNPLHSDVFQSVARFEAEVVSMTAS 209
           D VWQGKCSGTVYIGGSESEGHF++INEACSMFAHTNPLH DVFQS+ARFEAEVV+MTAS
Sbjct: 123 DAVWQGKCSGTVYIGGSESEGHFSIINEACSMFAHTNPLHLDVFQSIARFEAEVVAMTAS 182

Query: 210 LFGGKEKASGGEICGNMTSGGTESILLAVKSSRDYMKAKKGITRPEMIIPESGHSAYDKA 269
           L G KEKASGGEICGNMTSGGTESILLAVKSSRDYMK KKGITRPEMIIPES HSAYDKA
Sbjct: 183 LLGSKEKASGGEICGNMTSGGTESILLAVKSSRDYMKVKKGITRPEMIIPESAHSAYDKA 242

Query: 270 AQYFNIKLWRVPVNKKFEADVKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGELAFQY 329
           AQYFNIKLWRVPVNK+F+AD KAIRRHIN+NT+LIVGSAPGFPHGIIDPIEELGELAF+Y
Sbjct: 243 AQYFNIKLWRVPVNKEFQADAKAIRRHINRNTVLIVGSAPGFPHGIIDPIEELGELAFRY 302

Query: 330 GICLHVDLCLGGFVLPFAHNL 350
           GIC HVDLCLGGFVLPFA  L
Sbjct: 303 GICFHVDLCLGGFVLPFARKL 323