Jatropha Genome Database

JcCA0144801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0144801.10 + phase: 0 
         (249 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m004049 ribulose-5-phosphate-3-epimerase, putative              426   e-120
27960.m000033 ribulose-5-phosphate-3-epimerase, putative              217   5e-57
30190.m010953 ribulose-5-phosphate-3-epimerase, putative              157   5e-39

>30138.m004049 ribulose-5-phosphate-3-epimerase, putative
          Length = 264

 Score =  426 bits (1096), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/244 (89%), Positives = 221/244 (90%), Gaps = 18/244 (7%)

Query: 6   RKIHTVVKATARVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFV 65
           RKIHTVVKA+ARVDKFSKSDIIVSPSILSANFAKLGEQVKAV                  
Sbjct: 39  RKIHTVVKASARVDKFSKSDIIVSPSILSANFAKLGEQVKAVXX---------------- 82

Query: 66  PNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRT 125
             ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRT
Sbjct: 83  --ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRT 140

Query: 126 VNQIKDLGAKAGVVLNPATPLSAIEYVLDVVDLVLIMSVNPGFGGQGFIESQVKKISDLR 185
           VNQIK LGAKAGVVLNPATPLSAI+YVLDVVDLVLIMSVNPGFGGQ FIESQVKKISDLR
Sbjct: 141 VNQIKSLGAKAGVVLNPATPLSAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLR 200

Query: 186 RLCAEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPV 245
           RLCAEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK SKRPV
Sbjct: 201 RLCAEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKNSKRPV 260

Query: 246 AVPA 249
           AVPA
Sbjct: 261 AVPA 264


>27960.m000033 ribulose-5-phosphate-3-epimerase, putative
          Length = 228

 Score =  217 bits (552), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 114/221 (51%), Positives = 152/221 (68%), Gaps = 4/221 (1%)

Query: 28  VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 87
           ++PSILSA+FA+LGE+V+ V  AG D IH DVMD  +VPN+TIGPLV  A+RP   +P+D
Sbjct: 6   IAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCQAIRPHVQVPID 65

Query: 88  VHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKDLGAKAGVVLNPATPLS 147
           VHLM+   ++ +PDF KAGADI++ H E S   H+ RT+  I+D G KAG+V NP TPL 
Sbjct: 66  VHLMVKPVDRIIPDFAKAGADIITFHPEASE--HIDRTLQLIRDNGCKAGLVFNPGTPLH 123

Query: 148 AIEYVLDVVDLVLIMSVNPGFGGQGFIESQVKKISDLRRLCAE--KGVNPWIEVDGGVGP 205
            +E+V+D +D+VLIMSVNPGFGGQ FI   +KKI+  RR+  +  +G +  +EVDGG+  
Sbjct: 124 YLEHVMDKIDMVLIMSVNPGFGGQSFIPEALKKIALARRMIDQSGRGSDIMLEVDGGIKA 183

Query: 206 KNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPVA 246
            N     EAGA+  VAGSA+FG  DY   I  ++     VA
Sbjct: 184 DNIAAAAEAGADTFVAGSAIFGKPDYKAVIDAMRAELAGVA 224


>30190.m010953 ribulose-5-phosphate-3-epimerase, putative
          Length = 226

 Score =  157 bits (397), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/217 (40%), Positives = 130/217 (59%), Gaps = 8/217 (3%)

Query: 28  VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 87
           ++PS+LS++FA L  + + +   G DW+H+D+MDG FVPN+TIG  V+++LR  T   LD
Sbjct: 7   IAPSMLSSDFANLATEAERMLSCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLD 66

Query: 88  VHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKDLGAKAGVVLNPATPLS 147
            HLM+  P   V    KAGA   + H E S   +    + +IK  G + GV L P T + 
Sbjct: 67  CHLMVTNPIDYVEPLGKAGASGFTFHVEASRD-NWADLIQRIKSKGMRPGVALKPGTSIE 125

Query: 148 AIEYVLDV---VDLVLIMSVNPGFGGQGFIESQVKKISDLRRLCAEKGVNPWIEVDGGVG 204
            +  +++    V++VL+M+V PGFGGQ F+ + ++K+  LR+    K  +  IEVDGG+G
Sbjct: 126 EVYPLVECENPVEMVLVMTVEPGFGGQKFMPTMMEKVKTLRK----KYPSLDIEVDGGLG 181

Query: 205 PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 241
           P        AGAN +VAGS+VFGA + A  I  +K S
Sbjct: 182 PSTIDLAASAGANCIVAGSSVFGAPEPAHVISLMKKS 218