Jatropha Genome Database

JcCA0144381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0144381.10 - phase: 0 /partial
         (211 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28266.m000195 dihydrodipicolinate reductase, putative                 396   e-111

>28266.m000195 dihydrodipicolinate reductase, putative
          Length = 354

 Score =  396 bits (1017), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/211 (89%), Positives = 203/211 (96%)

Query: 1   MGKAVIKAADTAGLQILSVSFGSAEESGQTVQVCGKDIKIHGPSEREDVLASLYDEYPNL 60
           MGKAVIKAAD+AGLQIL VSFGS EESG TVQVCGKDIKI+GPSERE VLAS+ +E+PNL
Sbjct: 91  MGKAVIKAADSAGLQILPVSFGSPEESGITVQVCGKDIKIYGPSEREGVLASICNEHPNL 150

Query: 61  IVVDYTVPSAVNDNANLYCKVGVPFVMGTTGGDRDLLYKTVEDSKVYAVISPQMGKQVVA 120
           IVVDYTVP+AVN NA+LYCKVGVPFVMGTTGGDRDLLYKTVEDSK+YAVISPQMGKQVVA
Sbjct: 151 IVVDYTVPAAVNGNADLYCKVGVPFVMGTTGGDRDLLYKTVEDSKIYAVISPQMGKQVVA 210

Query: 121 FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMNQIQMI 180
           FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLD SGTAKAVISCFQKLGVSFDM+++QMI
Sbjct: 211 FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDISGTAKAVISCFQKLGVSFDMDKVQMI 270

Query: 181 RDPKLQIEMVGVPEDHLSGHAFHMYHLTSPD 211
           RDP+ QIEMVGVPE+HL+GHAFHMYHLTSPD
Sbjct: 271 RDPRQQIEMVGVPEEHLAGHAFHMYHLTSPD 301