Jatropha Genome Database

JcCA0143661.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0143661.10 + phase: 0 /pseudo/partial
         (221 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29827.m002537 acetylornithine deacetylase, putative                   225   1e-59

>29827.m002537 acetylornithine deacetylase, putative
          Length = 435

 Score =  225 bits (574), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 103/113 (91%), Positives = 111/113 (98%)

Query: 109 GVGVDALVKDGLLNKLKGGPLFWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLAHKAIN 168
           GVGVDALV+DGLL+KLKGGPLFWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLAHKAIN
Sbjct: 170 GVGVDALVQDGLLDKLKGGPLFWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLAHKAIN 229

Query: 169 PLELAMEALKEIQSRFYRDFPPHPKEKVYGFATPSTMKPTQWSYPGGGINQIP 221
            LELAM+AL+E+QSRFY+DFPPHP+E+VYGFAT STMKPTQWSYPGGGINQIP
Sbjct: 230 ALELAMDALQEMQSRFYKDFPPHPREQVYGFATASTMKPTQWSYPGGGINQIP 282



 Score = 73.2 bits (178), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 33/40 (82%), Positives = 37/40 (92%)

Query: 1  MAGIEEFLGELNRESFVSLLRKIIGESKHVQNNPPELIPR 40
          MA +EE LGEL++ESFV+LLRKIIGESKHVQNNPPELIP 
Sbjct: 1  MANVEEILGELDKESFVTLLRKIIGESKHVQNNPPELIPE 40