Jatropha Genome Database

JcCA0143421.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0143421.10 - phase: 0 
         (607 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29889.m003277 WD-repeat protein, putative                             892   0.0  
30076.m004662 WD-repeat protein, putative                             704   0.0  
30131.m007104 coatomer alpha subunit, putative                         65   8e-11
28470.m000440 U4/U6 small nuclear ribonucleoprotein Prp4, putative     64   2e-10
29647.m002072 WD-repeat protein, putative                              62   7e-10
30006.m000279 coatomer alpha subunit, putative                         60   2e-09
30073.m002288 U3 small nucleolar RNA-associated protein, putative      56   4e-08
28179.m000477 WD-repeat protein, putative                              55   1e-07
29848.m004547 taf5, putative                                           53   4e-07
30055.m001534 WD-repeat protein, putative                              52   9e-07
29841.m002801 WD-repeat protein, putative                              52   9e-07
29726.m004060 PP1/PP2A phosphatases pleiotropic regulator PRL1, ...    52   1e-06
29917.m001945 katanin P80 subunit, putative                            50   2e-06
29970.m001005 Polyadenylation factor subunit, putative                 49   7e-06

>29889.m003277 WD-repeat protein, putative
          Length = 1519

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/610 (71%), Positives = 460/610 (75%), Gaps = 50/610 (8%)

Query: 1   MALRKYIPSADAPSVGMKPLNFFSKVHENAQHADPETTVEPDVDVDLREVYFLIMHFLSA 60
           MALRKYIPS DAPS+GMKPL F  K HEN Q AD ET V  DVD+DLREVYFLIMHFLSA
Sbjct: 1   MALRKYIPSDDAPSLGMKPLRFSKKAHENGQDADAETRVPHDVDIDLREVYFLIMHFLSA 60

Query: 61  GPCHRTYGQFWNELLEHQLLPRRYHAWYSRNG----DENDDGLSFPLSYTKLVERYPHIE 116
           GPCHRTYGQFWNELLEHQLLPRRYHAWYSRNG    DENDDG SFPLSY KLVERYPH+E
Sbjct: 61  GPCHRTYGQFWNELLEHQLLPRRYHAWYSRNGAHSGDENDDGASFPLSYNKLVERYPHVE 120

Query: 117 KDHX-----------XXXXXXXXXNAASKSQGLIGVNALNAAVVPTLMGTGSFSLLSNDR 165
           KDH                     N  S SQGL+G   LNAA VPTL+GTG+FSLLS+D+
Sbjct: 121 KDHLVKLLKQLLLTDAASQGLADDNTESSSQGLVGSRVLNAAHVPTLLGTGAFSLLSDDK 180

Query: 166 DAEKAQVNHPPLHMRWPHMRADQVRGLGLREIGGGFSRHHRAPSVRAACYTIAKPSTMVQ 225
           D  + QV HPP HMRWPHM ADQVRGL LREIGGGF RHHRAPS+RAACYTIAKP+TMVQ
Sbjct: 181 DKGEDQVKHPPAHMRWPHMSADQVRGLSLREIGGGFPRHHRAPSIRAACYTIAKPATMVQ 240

Query: 226 KMQNIKRLRGHRNAVYCGMNFKIKLFNIHHLHSLKNIGPVSDTSLDVNPAAIFDRSGRYV 285
           KMQNIKRLRGHRNAVYC                                 AIFDRSGRYV
Sbjct: 241 KMQNIKRLRGHRNAVYC---------------------------------AIFDRSGRYV 267

Query: 286 ITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGL 345
           ITGSDDRLVKIWSMETAFCLASCRGHEGDITD               DCIIRVWRLPDGL
Sbjct: 268 ITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDCIIRVWRLPDGL 327

Query: 346 PISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPRIYIPRPSDXXX 405
           PIS+LRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPR+YIPRP D   
Sbjct: 328 PISVLRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPRLYIPRPLDSLA 387

Query: 406 XXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACKPNSDDSDQPNHEIDV 465
                         HQIFCCAFNANGTVFVTGSSDNLARVWNACK N DDSDQPNHEIDV
Sbjct: 388 GKNSGASSSSGPQTHQIFCCAFNANGTVFVTGSSDNLARVWNACKSNMDDSDQPNHEIDV 447

Query: 466 LSGHENDVNYVQFSGCAVAPRFSLTDSSKEENAPKFRNSWFSHDNIVTCSRDGSAIIWIP 525
           LSGH NDVNYVQFSGCAVA R SL+DSSKEEN PKFRNSWFSHDNIVTCSRDGSA+IW+P
Sbjct: 448 LSGHGNDVNYVQFSGCAVASRLSLSDSSKEENVPKFRNSWFSHDNIVTCSRDGSAMIWVP 507

Query: 526 RPRRSHGKVGRWTRHYHLKVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAA 585
           + RRSHGK GRWTR Y LK+                 ILPTPRGVNMI+WSLDNRFVLAA
Sbjct: 508 KSRRSHGKAGRWTRLYQLKIPAPPVPPQPPRGGPRQRILPTPRGVNMIIWSLDNRFVLAA 567

Query: 586 IMGNVCTVCM 595
           +M   C +C+
Sbjct: 568 VMD--CRICV 575


>30076.m004662 WD-repeat protein, putative
          Length = 1546

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/563 (63%), Positives = 398/563 (70%), Gaps = 45/563 (7%)

Query: 42  DVDVDLREVYFLIMHFLSAGPCHRTYGQFWNELLEHQLLPRRYHAWYSRNG----DENDD 97
           D DVDLREVYFLI+ FLS+GPC RT   FWNELLEH+LLPRRYHAW+SR+G    ++NDD
Sbjct: 32  DFDVDLREVYFLILSFLSSGPCQRTADLFWNELLEHELLPRRYHAWFSRSGVCSGNDNDD 91

Query: 98  GLSFPLSYTKLVERYPHIEKDHXXXXXXXXXXNAASKSQGLIGVNALNAAVVPTLMGTGS 157
           G+S PL+Y KLVERYPHIEKDH          +A S   G       NAA VPTL+G+GS
Sbjct: 92  GVSLPLNYNKLVERYPHIEKDHLIKLLKQLLLHADSPVDGNNEEYTPNAAKVPTLLGSGS 151

Query: 158 FSLLSNDRDAEKAQVNHPPLHMRWPHMRADQVRGLGLREIGGGFSRHHRAPSVRAACYTI 217
           FSLL +DR+  + QV   P+H+RWPHM+A QV GLGLREIGGGF++H RAPS R  CY I
Sbjct: 152 FSLLDSDRNMGE-QVKRLPVHLRWPHMQAHQVHGLGLREIGGGFAKHQRAPSFRCTCYAI 210

Query: 218 AKPSTMVQKMQNIKRLRGHRNAVYCGMNFKIKLFNIHHLHSLKNIGPVSDTSLDVNPAAI 277
           AKPSTMV KMQNIK+LRGHR+AVYC                                 AI
Sbjct: 211 AKPSTMVPKMQNIKKLRGHRDAVYC---------------------------------AI 237

Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
           FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITD               D +IR
Sbjct: 238 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNALVASASNDFVIR 297

Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPRIYI 397
           VWRLPDGLPIS+LRGHTGAVTAIAFSPRP SVYQLLSSSDDG+CRIWDARYS  SPRIY 
Sbjct: 298 VWRLPDGLPISVLRGHTGAVTAIAFSPRPNSVYQLLSSSDDGSCRIWDARYSQCSPRIYA 357

Query: 398 PRPSDXXXXXXXXXXXXXXXX-----XHQIFCCAFNANGTVFVTGSSDNLARVWNACKPN 452
           PRP+D                      +QI CCA+NANGTVFVTGSSD  ARVW+ACK +
Sbjct: 358 PRPADAVVGKNKGPSSNGPSSSNGPHNYQILCCAYNANGTVFVTGSSDTYARVWSACKSS 417

Query: 453 SDDSDQPNHEIDVLSGHENDVNYVQFSGCAVAPRFSLTDSSKEENAPKFRNSWFSHDNIV 512
           +D+SDQP +EIDVLSGHENDVNYVQFSGCAVA R S +D+ KE+N PKF+NSWF HD IV
Sbjct: 418 TDESDQPIYEIDVLSGHENDVNYVQFSGCAVASRSSFSDALKEDNIPKFKNSWFCHDKIV 477

Query: 513 TCSRDGSAIIWIPRPRRSHGKVGRWTRHYHLKVXXXXXXXXXXXXXXXXXILPTPRGVNM 572
           TCSRDGSAIIW P  R SHGK  +W R YHLKV                 ILPTPRGVNM
Sbjct: 478 TCSRDGSAIIWTPTSRNSHGKSLQWGRSYHLKVPPPPLPPQPPRGGPRQRILPTPRGVNM 537

Query: 573 IVWSLDNRFVLAAIMGNVCTVCM 595
           IVWSLDNRFVLAAIM   C +C+
Sbjct: 538 IVWSLDNRFVLAAIMD--CRICV 558


>30131.m007104 coatomer alpha subunit, putative
          Length = 1217

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 82/208 (39%), Gaps = 17/208 (8%)

Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
           F +S    ++G DD  +K+W+ +   CL +  GH   I                 D  IR
Sbjct: 59  FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118

Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA---RYSNFSPR 394
           +W       IS+L GH   V   +F P+   V   +S+S D T R+WD    R    SP 
Sbjct: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLV---VSASLDQTVRVWDIGALRKKTVSPA 175

Query: 395 IYIPRPS----DXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACK 450
             I R S    D                   +   AF+ N  + V+G+ D   ++W    
Sbjct: 176 DDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPNLPLIVSGADDRQVKLWRM-- 233

Query: 451 PNSDDSDQPNHEIDVLSGHENDVNYVQF 478
                +D    E+D L GH N+V+ V F
Sbjct: 234 -----NDTKAWEVDTLRGHMNNVSCVMF 256


>28470.m000440 U4/U6 small nuclear ribonucleoprotein Prp4, putative
          Length = 541

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 82/213 (38%), Gaps = 41/213 (19%)

Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
           F  SG+Y+ T S D+  ++W ++T   L    GH   +                 D + R
Sbjct: 341 FHPSGKYLGTTSFDKTWRLWDVDTGAELLLQEGHSRSVYGLAFHHDGSLAGSCGLDALAR 400

Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPRIY- 396
           VW L  G  +  L GH   V  I+FSP   + Y L +  +D TCRIWD R       +Y 
Sbjct: 401 VWDLRTGRSVLALEGHVKPVLGISFSP---NGYHLATGGEDNTCRIWDLRKKK---SLYI 454

Query: 397 IPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFN-ANGTVFVTGSSDNLARVWNA--CKPNS 453
           IP  S+                   I    F    G   VT S D  A+VW+    KP  
Sbjct: 455 IPAHSNL------------------ISQVKFEPQEGYCLVTASYDMTAKVWSGRDFKP-- 494

Query: 454 DDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 484
                    +  L GHE+ V  +     GC +A
Sbjct: 495 ---------VKTLLGHESKVTSLDIGADGCYIA 518


>29647.m002072 WD-repeat protein, putative
          Length = 318

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 116/296 (39%), Gaps = 56/296 (18%)

Query: 218 AKPSTMVQKMQNIKRLRGHRNAVYC-------------GMNFKIKLFNIHHLHSLKNIGP 264
           ++P +  +  + +K LR H  AV C              ++  + +++  +L  L  +  
Sbjct: 9   SQPPSPYKPYRLLKTLRAHERAVSCVKFSNDGTLLASASLDKTLIIWSASNLSLLHRLFG 68

Query: 265 VSDTSLDVNPAAIFDRSGRYVITGSDDRLVKIWSMETAF-CLASCRGHEGDITDXXXXXX 323
            S+   D+     +     Y+ + SDDR ++IW     F CL + +GH   +        
Sbjct: 69  HSEGVSDL----AWSSDSHYICSASDDRSLRIWDARPPFDCLKTLKGHSDVVFCVNFNPQ 124

Query: 324 XXXXXXXXXDCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRI 383
                    D  IR+W +  G  +S++R H+  VT++ F+ R GS+  ++S S DG+C+I
Sbjct: 125 SNLIVSGSFDETIRIWEVKTGRCMSVIRAHSMPVTSVHFN-RDGSL--IVSGSHDGSCKI 181

Query: 384 WDA-----------------RYSNFSP--RIYIPRPSDXXXX----XXXXXXXXXXXXXH 420
           W+A                  ++ FSP  +  +    D                     +
Sbjct: 182 WEASTGAWLKTLIDDKDPAVSFAKFSPNGKFILVATLDSTLKLWNYSSGKFLKIYTGHTN 241

Query: 421 QIFCCAFN---ANGTVFVTGSSDNLARVWNACKPNSDDSDQPNHEIDVLSGHENDV 473
           +++C        NG   V+GS DN   +W+          Q    +  L GH + V
Sbjct: 242 RVYCLTATFSVTNGKYIVSGSEDNCVYLWDL---------QQKTMVQKLEGHSDTV 288


>30006.m000279 coatomer alpha subunit, putative
          Length = 1217

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 80/208 (38%), Gaps = 17/208 (8%)

Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
           F  S    ++G DD  +K+W+ +   CL +  GH   I                 D  IR
Sbjct: 59  FHNSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118

Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA---RYSNFSPR 394
           +W       IS+L GH   V   +F P+   V   +S+S D T R+WD    R    SP 
Sbjct: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLV---VSASLDQTVRVWDIGALRKKTVSPA 175

Query: 395 IYIPRPS----DXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACK 450
             I R S    D                   +   +F+    + V+G+ D   ++W    
Sbjct: 176 DDILRLSQMNTDIFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRM-- 233

Query: 451 PNSDDSDQPNHEIDVLSGHENDVNYVQF 478
                +D    E+D L GH N+V+ V F
Sbjct: 234 -----NDTKAWEVDALRGHMNNVSCVMF 256


>30073.m002288 U3 small nucleolar RNA-associated protein, putative
          Length = 876

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 1/103 (0%)

Query: 283 RYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 342
           + + +    R +++W + T  C+ S +GHEG +                 D  + VW + 
Sbjct: 68  KLMFSAGHSRQIRVWDLSTMKCVRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVD 127

Query: 343 DGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 385
            G      +GH G V+++ F P    +  L S SDD T R+W+
Sbjct: 128 GGFCTHFFKGHKGVVSSVMFHPDANKML-LFSGSDDATVRVWN 169



 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 88/238 (36%), Gaps = 37/238 (15%)

Query: 272 VNPAAIFDRSGRYVITGSDDRLVKIWSME----------TAFCLASCRGHEGDITDXXXX 321
           V   A   +   + ++GS DR +K+WS++               A    H+ DI      
Sbjct: 440 VGAVAFSKKLKNFFVSGSSDRTIKVWSLDGISEDADQFVNLKAKAVVAAHDKDINSLAIA 499

Query: 322 XXXXXXXXXXXDCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTC 381
                      D    VWRLPD + + +L+GH   + ++ FSP    V   +++S D T 
Sbjct: 500 PNDSLVCSGSQDRTACVWRLPDLVSVVVLKGHKRGIWSVEFSPVDQCV---ITASGDKTI 556

Query: 382 RIWDARYSNFSPRIYIPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDN 441
           +IW A       + +    S                    +   +F   GT FV+  +D 
Sbjct: 557 KIW-AIADGSCLKTFEGHTS-------------------SVLRASFLTRGTQFVSCGADG 596

Query: 442 LARVWNACKPNSDDSDQPNHEIDVLS---GHENDVNYVQFSGCAVAPRFSLTDSSKEE 496
           L ++W   K N   +    HE  V +   G + ++         V   +  T S KEE
Sbjct: 597 LVKLWTV-KTNECIATYDQHEDKVWALAVGKQTEMFATGGGDALVNLWYDSTASDKEE 653


>28179.m000477 WD-repeat protein, putative
          Length = 322

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 40/210 (19%)

Query: 278 FDRSGRYVITGSDDRLVKIWSMETA-------FCLASCRGHEGDITDXXXXXXXXXXXXX 330
           F   GR++ + S D+ +K +S+  +         L    GHE  ++D             
Sbjct: 33  FSSDGRFLASSSADKTLKTYSLSPSNPPTSPLTPLHEFHGHEQGVSDVSFSSDSRFLVSA 92

Query: 331 XXDCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSN 390
             D  IR+W +  G  I  L GHT  V  + F+P+      ++S S D T RIWD +   
Sbjct: 93  SDDKTIRLWDVTTGSQIKTLNGHTNYVFCVNFNPQSN---MIVSGSFDETVRIWDVKTGK 149

Query: 391 FSPRIYIPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACK 450
                 +P  SD                   +    FN +G++ V+ S D L R+W++  
Sbjct: 150 CLK--VLPAHSD------------------PVTAVDFNRDGSLIVSSSYDGLCRIWDS-- 187

Query: 451 PNSDDSDQPNHEIDVLSGHEN-DVNYVQFS 479
                     H +  L   EN  V++V+FS
Sbjct: 188 -------GTGHCVKTLIDDENPPVSFVKFS 210


>29848.m004547 taf5, putative
          Length = 670

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 284 YVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPD 343
           Y+ TGS D+ V++W +++  C+    GH   I                 D  I +W L  
Sbjct: 517 YIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRFMASADEDGTIMMWDLSS 576

Query: 344 GLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYS 389
           G  +S L GH   V  +AFS   GS+  L S S D T ++WD   S
Sbjct: 577 GRCVSPLMGHNSCVWTLAFSCE-GSL--LASGSADCTVKLWDVTSS 619



 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 66/170 (38%), Gaps = 23/170 (13%)

Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
           F   G Y  + S DR  +IWSM+    L    GH  D+                 D  +R
Sbjct: 469 FSPVGHYFASASHDRTARIWSMDRLQPLRILAGHLSDVDCVQWHANCNYIATGSSDKTVR 528

Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPRIYI 397
           +W +  G  + I  GH   + ++A SP  G    + S+ +DGT  +WD      S R   
Sbjct: 529 LWDVQSGECVRIFIGHRSMILSLAMSP-DGRF--MASADEDGTIMMWDLS----SGRCVS 581

Query: 398 PRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWN 447
           P                       ++  AF+  G++  +GS+D   ++W+
Sbjct: 582 PLMGHNSC----------------VWTLAFSCEGSLLASGSADCTVKLWD 615


>30055.m001534 WD-repeat protein, putative
          Length = 893

 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 280 RSGRYVITGSDDRLV-----KIWSMETAF------------CLASCRGHEGDITDXXXXX 322
           + GRYV +GSDD+++     K  S  T F               + RGH  D+ D     
Sbjct: 76  KHGRYVASGSDDQVILVHERKPGSGTTEFGSGEPPDVENWKVAMTLRGHTADVVDLNWSP 135

Query: 323 XXXXXXXXXXDCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCR 382
                     D  I +W + +G+  ++LRGH+  V  +A+ P  GS   + S SDD T  
Sbjct: 136 DDSTLASGSLDNTIHIWNMSNGICTAVLRGHSSLVKGVAWDP-IGSF--IASQSDDKTVI 192

Query: 383 IWDARYSNFS 392
           IW  R S++S
Sbjct: 193 IW--RTSDWS 200


>29841.m002801 WD-repeat protein, putative
          Length = 895

 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 80/208 (38%), Gaps = 35/208 (16%)

Query: 275 AAIFDRSGRYVITG-SDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXD 333
            A+F+ +G ++  G +    + +W   +   +   +GH  D+                 D
Sbjct: 346 TAVFNETGNWLTFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADD 405

Query: 334 CIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA-RYSNFS 392
             ++VW    G        HT AVTA+ F     + + LLS+S DGT R WD  RY NF 
Sbjct: 406 NKVKVWTASSGFCFLTFSEHTNAVTALHF---IANNHSLLSASLDGTVRAWDLFRYRNFR 462

Query: 393 PRIYIPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLA-RVWNACKP 451
                  PS                   Q    A + +G V   G+ D+    VW     
Sbjct: 463 T---FTTPS-----------------SRQFVSLAADQSGEVICAGTLDSFEIFVW----- 497

Query: 452 NSDDSDQPNHEIDVLSGHENDVNYVQFS 479
               S +    +DVLSGHE  V+ + FS
Sbjct: 498 ----SMKTGRLLDVLSGHEGPVHGLTFS 521


>29726.m004060 PP1/PP2A phosphatases pleiotropic regulator PRL1,
           putative
          Length = 415

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 3/110 (2%)

Query: 278 FDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 337
           FD S  +  TGS DR +KIW + T     +  GH   +                 D  ++
Sbjct: 113 FDPSNTWFCTGSADRTIKIWDVGTGRLKLTLTGHIEQVRGLAVSQRHTYMFSAGDDKQVK 172

Query: 338 VWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 387
            W L     +    GH   V  +A  P   ++  LL+   D  CR+WD R
Sbjct: 173 CWDLEQNKVVRSYHGHLSGVYCLAIHP---TIDLLLTGGRDSVCRVWDVR 219


>29917.m001945 katanin P80 subunit, putative
          Length = 936

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 63/179 (35%), Gaps = 23/179 (12%)

Query: 269 SLDVNPAAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXXXXXXX 328
           S +VN   I  ++ R  ITG DD  V +W++     L S  GH   +             
Sbjct: 26  SSNVNCLNIGKKTCRMYITGGDDYKVNLWAIGKPTSLMSLCGHTSPVESLAFDTAEVLVL 85

Query: 329 XXXXDCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARY 388
                 +I++W L +   +  L GH    TAI F P  G  +   S S D   ++WD R 
Sbjct: 86  GGASTGVIKLWDLEEAKMVRTLTGHRSNCTAIEFHPF-GEFFA--SGSADTNLKLWDIRK 142

Query: 389 SNFSPRIYIPRPSDXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWN 447
                                            I    F  +G   V+G  DN+ +VW+
Sbjct: 143 KG--------------------TLHTYKGHTRGISTIRFTPDGRWVVSGGLDNVVKVWD 181


>29970.m001005 Polyadenylation factor subunit, putative
          Length = 582

 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 15/145 (10%)

Query: 268 TSLDVNPAAIF----DRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDXXXXXX 323
           T+L  +   IF    ++ G +++TGS D+   +W ++T         H G I D      
Sbjct: 328 TTLSKHKGPIFSLKWNKKGDFLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPILD-VDWRN 386

Query: 324 XXXXXXXXXDCIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRI 383
                    D +I V R+ D  P+    GH G V  + + P  GS+  L S SDD + +I
Sbjct: 387 NTSFATSSTDNMIYVCRVGDNRPVKTFAGHQGEVNCVKWDP-TGSL--LASCSDDISAKI 443

Query: 384 WDARYSNF-------SPRIYIPRPS 401
           W  +   +       S  IY  R S
Sbjct: 444 WSMKQDKYVHDLREHSKEIYTIRWS 468