Jatropha Genome Database
- JcCA0142811.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0142811.10 + phase: 0 /partial
(166 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29790.m000814 mads box protein, putative 170 2e-43
30174.m009079 mads box protein, putative 147 2e-36
30138.m003939 mads box protein, putative 120 4e-28
30138.m003941 mads box protein, putative 76 6e-15
30174.m008934 mads box protein, putative 74 3e-14
30174.m009080 mads box protein, putative 73 8e-14
29929.m004629 mads box protein, putative 68 2e-12
30026.m001501 mads box protein, putative 66 9e-12
29790.m000813 mads box protein, putative 64 4e-11
30174.m008936 mads box protein, putative 60 5e-10
30190.m011098 mads box protein, putative 56 6e-09
30147.m014133 mads box protein, putative 52 1e-07
30147.m014137 mads box protein, putative 52 2e-07
28333.m000571 mads box protein, putative 50 4e-07
30170.m013818 mads box protein, putative 50 5e-07
30147.m014483 MADS-box transcription factor, putative 50 6e-07
29804.m001536 mads box protein, putative 50 7e-07
29596.m000699 mads box protein, putative 49 1e-06
>29790.m000814 mads box protein, putative
Length = 188
Score = 170 bits (431), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/132 (68%), Positives = 105/132 (79%), Gaps = 3/132 (2%)
Query: 1 MERILERYERYSFSER--APNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
ME IL+RYER + +E+ PND+E Q W +E PKL ARI ILERSLRN AG+DL M+L
Sbjct: 1 MEAILDRYERCASAEKQAVPNDSEKQGTWCLEYPKLVARIEILERSLRNFAGKDLGPMSL 60
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLA-E 117
RELQHLE QID ALKRVRSRKNQLYH+SL LQK ERSLH+QNN+L+KQL+EN+K L E
Sbjct: 61 RELQHLEQQIDTALKRVRSRKNQLYHESLAALQKNERSLHEQNNMLAKQLKENEKTLTRE 120
Query: 118 DAQWEQQNLGQN 129
QWEQQNL QN
Sbjct: 121 REQWEQQNLSQN 132
>30174.m009079 mads box protein, putative
Length = 180
Score = 147 bits (371), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 104/131 (79%), Gaps = 2/131 (1%)
Query: 1 MERILERYERYSFSER--APNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
MERILERYERYS++ER D SQENW +E +LKA++ +L+R+ R+ GEDLDS+TL
Sbjct: 1 MERILERYERYSYAERQLVATDLNSQENWTLEYNRLKAKVELLQRNHRHYLGEDLDSLTL 60
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAED 118
+ELQ+LE Q+D ALK +R+RKNQL +S+ ELQK+E+++ +QNN+LSKQ++E +K +A+
Sbjct: 61 KELQNLEQQLDTALKHIRTRKNQLMFESISELQKKEKAIQEQNNMLSKQIKEKEKAVAQQ 120
Query: 119 AQWEQQNLGQN 129
A WEQQN G N
Sbjct: 121 ALWEQQNHGNN 131
>30138.m003939 mads box protein, putative
Length = 244
Score = 120 bits (300), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 86/106 (81%), Gaps = 2/106 (1%)
Query: 1 MERILERYERYSFSER--APNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
MERILERYERYS++ER DTE+ +W +E KLKAR+ +L+R+ R+ GE+LD++TL
Sbjct: 63 MERILERYERYSYAERQLLATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEELDTLTL 122
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLL 104
++LQ+LE QID+ALK VRSRKNQL ++S+ ELQK++++L +QNN L
Sbjct: 123 KDLQNLEQQIDSALKHVRSRKNQLMYESISELQKKDKALQEQNNQL 168
>30138.m003941 mads box protein, putative
Length = 166
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 59/90 (65%)
Query: 33 KLKARIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQK 92
KLKAR+ +L+RS RNL GEDL + +EL+ LEHQ++ +LK +RS K Q D L +LQ
Sbjct: 18 KLKARVEVLQRSQRNLLGEDLAPLDTKELEQLEHQLETSLKHIRSTKTQFILDQLTDLQN 77
Query: 93 QERSLHDQNNLLSKQLEENQKKLAEDAQWE 122
+E+ L D N L ++LEE+ ++ WE
Sbjct: 78 REQLLLDANKALRRKLEESSAQVPLGLAWE 107
>30174.m008934 mads box protein, putative
Length = 244
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 67/107 (62%)
Query: 3 RILERYERYSFSERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLRELQ 62
+ LERY+R F+ + + +NW E KLKA+ L+R+ R+L GEDL ++++ELQ
Sbjct: 64 KTLERYQRCCFTPQDNSIERETQNWYQEVTKLKAKYESLQRTQRHLLGEDLGPLSVKELQ 123
Query: 63 HLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLE 109
+LE Q++ AL R RK Q+ + + +L+K+ER L D N L +LE
Sbjct: 124 NLEKQLEGALALARQRKTQIMIEQMEDLRKKERHLGDLNKQLKFKLE 170
>30174.m009080 mads box protein, putative
Length = 198
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 1 MERILERYERYSFSERAPN-DTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLR 59
M + +E+Y+R S+ N +N E KLK+R+ L+RS R+ GEDL ++ +
Sbjct: 22 MAKTIEKYQRCSYGALEANQSVHDTQNSYQEYLKLKSRVEALQRSQRHFLGEDLGNLGTK 81
Query: 60 ELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAEDA 119
+L+ LEHQ+D++LK VR K+ D L +LQ++E L NN L K+LEE L
Sbjct: 82 DLEQLEHQLDSSLKHVRLTKSNFMLDQLSQLQRKEEMLLQTNNALRKKLEETNAAL--QP 139
Query: 120 QWE 122
WE
Sbjct: 140 PWE 142
>29929.m004629 mads box protein, putative
Length = 182
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 11/118 (9%)
Query: 1 MERILERYERYSFSERAPN-------DTESQENWPVECPKLKARIGILERSLRNLAGEDL 53
M + LERY++ ++ PN + SQ+ + KLKAR L+RS RNL GEDL
Sbjct: 4 MLKTLERYQKCNYGAPEPNVSAREALELSSQQEYL----KLKARYEALQRSQRNLLGEDL 59
Query: 54 DSMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEEN 111
++ ++L+ LE Q+D +LK++RS + Q D L +LQ++E L++ N L ++L E
Sbjct: 60 GPLSSKDLESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRLVEG 117
>30026.m001501 mads box protein, putative
Length = 177
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
Query: 5 LERYERYSFSERAPNDTESQEN---WPVECPKLKARIGILERSLRNLAGEDLDSMTLREL 61
++RY++ S ++ + + S+ N + E KL+ +IG L+ S R++ GE L ++ L++L
Sbjct: 18 IDRYKKVS-TDSSTTGSVSEANAQFYQQEAAKLRVQIGNLQNSNRHMLGESLGALNLKDL 76
Query: 62 QHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKK 114
+ LE +++ + R+RS+KN+L + +QK+E LH+ N LL ++ EN++K
Sbjct: 77 KGLEGRLEKGISRIRSKKNELLFAEIEYMQKREIDLHNNNQLLRAKIAENERK 129
>29790.m000813 mads box protein, putative
Length = 180
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 MERILERYERYSFSERAPNDTESQ-ENWPVECPKLKARIGILERSLRNLAGEDLDSMTLR 59
M + LERY++ S+ N + E+ E KLK R L+++ RNL GEDL ++ +
Sbjct: 1 MLKTLERYQKCSYGAVEVNKPAKELESSYREYLKLKTRFESLQKTQRNLLGEDLGPLSTK 60
Query: 60 ELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEE 110
EL+ LE Q++++LK VRS + Q D L +LQ +E+ L + N L+ +L+E
Sbjct: 61 ELEQLERQLESSLKLVRSTRTQFMLDQLSDLQNKEQLLLEANRALTLKLDE 111
>30174.m008936 mads box protein, putative
Length = 157
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 1 MERILERYERYSF---SERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMT 57
M+ +ERY R+ + + P D Q E L +I +LE S R L G+ L S
Sbjct: 1 MQDTIERYRRHVKEHQTNKKPTDENMQHQLKSEAGNLMKKIELLEVSKRKLLGQGLGSCN 60
Query: 58 LRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLS 105
L ELQ +E Q++ ++ +R+RKNQ++ + + +L+++E+ L +N LS
Sbjct: 61 LEELQQIEQQLEKSVSSIRARKNQVFKEQIEQLKEKEKQLAAENARLS 108
>30190.m011098 mads box protein, putative
Length = 154
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 52/74 (70%)
Query: 34 LKARIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQ 93
L +I +LE S R L G+ L+ ++ ELQ LE+Q++ +L R+R+RKNQL+ + + +L+++
Sbjct: 41 LAKKIELLEVSKRKLLGDGLEPCSVDELQQLENQLERSLTRIRTRKNQLFGEKIEKLREE 100
Query: 94 ERSLHDQNNLLSKQ 107
E+ L ++N L K+
Sbjct: 101 EKILMEENTKLRKK 114
>30147.m014133 mads box protein, putative
Length = 213
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 1 MERILERYERYSFSERAPNDTESQEN---WPVECPKLKARIGILERSLRNLAGEDLDSMT 57
M++ +ERY +++ +A +++ E L +I LE S R L G+ L S +
Sbjct: 62 MQKTIERYRKHAKEVQAAGSVAKEQHVQELTEESAALVKKIEELEISQRKLLGQGLSSCS 121
Query: 58 LRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEEN 111
+ ELQ + Q++ +L +RSRK QL+ + + +L+ +ER L ++N L ++ EN
Sbjct: 122 IEELQEIHSQLERSLSNIRSRKVQLFKEQMEQLKAKERLLLEENIRLREKCAEN 175
>30147.m014137 mads box protein, putative
Length = 154
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 30 ECPKLKARIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLE 89
E +LK + L+ +L GE+L ++++ELQ +E Q+D L + R RK QL + + E
Sbjct: 10 EVTRLKTKYESLQCCQSHLLGEELGPLSVKELQKIEKQLDRTLSQARQRKTQLLVERMEE 69
Query: 90 LQKQERSLHDQNNLLSKQLEENQ 112
L+K+E L ++N L +LEE Q
Sbjct: 70 LRKKEHDLGEENKQLKIKLEEGQ 92
>28333.m000571 mads box protein, putative
Length = 173
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 1 MERILERYERYSFS-ERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLR 59
M+ I+ERY + ++ N T + W E L+ ++ L+ S R GE L ++++
Sbjct: 1 MKSIIERYNKTKEEHQQLLNPTSEVKFWQREAAVLRQQLHNLQESHRQFMGEQLYGLSVK 60
Query: 60 ELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQL 108
+LQ LE+Q++ +L+ +R++K Q+ D + EL ++ +H +N L K++
Sbjct: 61 DLQSLENQLEMSLRGIRTKKEQILTDEIQELSRKGNLIHQENVELYKKV 109
>30170.m013818 mads box protein, putative
Length = 287
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 77/128 (60%), Gaps = 9/128 (7%)
Query: 1 MERILERYER-YSFSERAPNDTE-SQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
++ +ERY++ S S + TE + + + E KL+ +I +L+ S R+L G+ L S+T+
Sbjct: 107 IKSTIERYKKACSDSSNTSSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTV 166
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAED 118
+EL+ LE++++ + R+RS+K++L + LQK+E L +++ L + K+AE
Sbjct: 167 KELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVCL-------RTKIAEI 219
Query: 119 AQWEQQNL 126
+ +Q N+
Sbjct: 220 ERLQQANM 227
>30147.m014483 MADS-box transcription factor, putative
Length = 121
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 1 MERILERYERYSFSERAPND--TESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
M+R + RY R D T S E W E +LK I +E L++ +GED+ + +
Sbjct: 1 MDRTIARY-RSEVGLLGSTDLRTRSLEYWRNEIEELKRTIDTMETRLKHFSGEDISVLGM 59
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQN 101
+EL+ LE + ++R+RS+K+++ + LQK+ L D N
Sbjct: 60 KELKQLERHLKVGVERIRSKKHKVLQEENNRLQKRLHELQDAN 102
>29804.m001536 mads box protein, putative
Length = 266
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 1 MERILERYERYSFSERAPNDTESQ-ENWPVECPKLKARIGILERSLRNLAGEDLDSMTLR 59
M ++ERY + ++ + S+ + W E L+ + L+ S R L GE+L ++ +
Sbjct: 89 MNSVIERYNKLKEEQQQLMNPASEIKFWQREAASLRKELQYLQESHRQLMGEELSGLSAK 148
Query: 60 ELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLE 109
+LQ+LE+Q++ +LK VR +K+Q+ D + EL ++ +++N L K++E
Sbjct: 149 DLQNLENQLEMSLKGVRMKKDQILTDEIRELNRKGNLTYEENLKLHKKVE 198
>29596.m000699 mads box protein, putative
Length = 262
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 1 MERILERYERYSF-SERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLR 59
M+ I+ERY + + + N + W E L+ ++ L+ + R + GE+L ++++
Sbjct: 62 MKSIIERYNKSKEENNQTGNPISEVKFWQREAAMLRQQLQNLQENHRQMMGEELSGLSIK 121
Query: 60 ELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQL 108
ELQ+LE +++ +L+ VR +K+QL D + EL ++ +H +N L K++
Sbjct: 122 ELQNLEGRLEMSLRGVRMKKDQLLMDEIEELNRKGNLIHQENVELYKKV 170