Jatropha Genome Database

JcCA0142191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0142191.20 - phase: 0 /pseudo/partial
         (109 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29678.m000504 alcohol dehydrogenase, putative                          71   1e-13
29678.m000499 alcohol dehydrogenase, putative                          70   3e-13
29678.m000501 alcohol dehydrogenase, putative                          69   4e-13
29678.m000498 alcohol dehydrogenase, putative                          69   6e-13
29929.m004505 alcohol dehydrogenase, putative                          60   3e-10
28320.m001123 alcohol dehydrogenase, putative                          52   4e-08
28320.m001125 alcohol dehydrogenase, putative                          47   2e-06

>29678.m000504 alcohol dehydrogenase, putative
          Length = 345

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 43/52 (82%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           P   +M+IP IKEGKIVYVED+A+G+E+ P A++G+FRG N+GKQ+V VA E
Sbjct: 294 PNLLDMVIPYIKEGKIVYVEDVAEGLENAPTALIGIFRGRNVGKQLVVVARE 345


>29678.m000499 alcohol dehydrogenase, putative
          Length = 368

 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/51 (64%), Positives = 42/51 (82%)

Query: 59  KYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           K+ + ++P I+EGKI YVEDIA+GIES PAA+VG+F G N+GKQVV VA E
Sbjct: 318 KFLDFVLPYIREGKITYVEDIAEGIESAPAALVGLFSGRNVGKQVVAVAHE 368


>29678.m000501 alcohol dehydrogenase, putative
          Length = 332

 Score = 68.9 bits (167), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 43/52 (82%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           PK+ ++++P IKEGKI YVEDI +G+E+GPAA++G++ G N+GKQVV V  E
Sbjct: 280 PKFLDVVLPYIKEGKITYVEDIVEGLENGPAALIGLYTGQNIGKQVVAVTHE 331


>29678.m000498 alcohol dehydrogenase, putative
          Length = 352

 Score = 68.6 bits (166), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 42/51 (82%)

Query: 59  KYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           K+ + ++P I+EGKI YVEDIA+G+ES PAA+VG+F G N+GKQVV VA E
Sbjct: 302 KFLDFVLPLIREGKITYVEDIAEGLESAPAALVGLFSGRNVGKQVVAVARE 352


>29929.m004505 alcohol dehydrogenase, putative
          Length = 348

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 39/52 (75%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           P++ E +    K+GKIVY+ED+ +G+ES PAA  G+F G N+GKQV++VA E
Sbjct: 297 PQFLEQVSNYYKQGKIVYIEDMNEGLESAPAAFAGLFSGKNVGKQVIRVAYE 348


>28320.m001123 alcohol dehydrogenase, putative
          Length = 50

 Score = 52.4 bits (124), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 35/42 (83%)

Query: 68  IKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           I+ GKI  +EDI+DGI S P+A VG+F+G N+GK++VK+ADE
Sbjct: 8   IRNGKIQVLEDISDGILSIPSAFVGLFKGDNVGKKMVKIADE 49


>28320.m001125 alcohol dehydrogenase, putative
          Length = 346

 Score = 46.6 bits (109), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/42 (45%), Positives = 34/42 (80%)

Query: 68  IKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           ++ GK+  +EDI+ G+ES P +++G+FRG N+GK++V++A E
Sbjct: 305 LRAGKMHVLEDISTGVESIPTSLIGLFRGHNIGKKMVQLAAE 346