Jatropha Genome Database

JcCA0141541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0141541.10 - phase: 0 
         (392 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29848.m004594 conserved hypothetical protein                          649   0.0  
27394.m000350 conserved hypothetical protein                          429   e-120
29848.m004510 conserved hypothetical protein                          419   e-117
30204.m001770 conserved hypothetical protein                           80   1e-15

>29848.m004594 conserved hypothetical protein
          Length = 392

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/392 (82%), Positives = 337/392 (85%)

Query: 1   MSWRYKAGLFLISAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFLKDWI 60
           MSWRYKAGLFLI+AVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFLKDWI
Sbjct: 1   MSWRYKAGLFLIAAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFLKDWI 60

Query: 61  CKMIXXXXXXXXXXXXXLNESSDGLNSPLSRKIFEMELQGTLSKKGSEADLSSQAEAKPL 120
           CK++             LNE SDGLNSPLS+KIFEMELQGTL++K SEADLSS+AE KPL
Sbjct: 61  CKILKHRSSKSGKDAGSLNECSDGLNSPLSQKIFEMELQGTLTRKDSEADLSSEAEGKPL 120

Query: 121 VPRXXXXXXXXXXXXELTAREIATYGFYIAPIWFVTEYLSNAALARXXXXXXXXXXXXXX 180
           VPR            ELT REIATYGFYIAPIWFVTEYLSNAALAR              
Sbjct: 121 VPRHKDDLNVLKHDKELTTREIATYGFYIAPIWFVTEYLSNAALARTSVASTTVLSSTSG 180

Query: 181 XXXXXIGVFLGQDTLNAAKVVAVFVSMAGVAMTTLGKTWAADDSQLSASINGKRSLVGDL 240
                IGVFLGQDTLNAAKV AV VSMAGV MT LGKTWAAD+SQLS SINGKRS VGDL
Sbjct: 181 LFTLFIGVFLGQDTLNAAKVAAVLVSMAGVVMTALGKTWAADESQLSTSINGKRSFVGDL 240

Query: 241 FGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKF 300
           FGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLV PLTALGIEPKF
Sbjct: 241 FGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLVLPLTALGIEPKF 300

Query: 301 TIPHSAKVDEVVIANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMMIHGR 360
           TIPHSAK+DEVV+ANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADM+IHGR
Sbjct: 301 TIPHSAKMDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGR 360

Query: 361 HYSAIYILGSAQVFAGFVIANLSDWFSKKLGL 392
           HYSAIYILGSAQVFAGFVIANLSDWFS+KLGL
Sbjct: 361 HYSAIYILGSAQVFAGFVIANLSDWFSRKLGL 392


>27394.m000350 conserved hypothetical protein
          Length = 411

 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/394 (55%), Positives = 270/394 (68%), Gaps = 15/394 (3%)

Query: 1   MSWRYKAGLFLISAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFLKDWI 60
           M W YK GL LI  VVI+WV+SAEVTQG+FTDYK PFAVTYLG SL+V+YLP+AF+K+W+
Sbjct: 1   MCWTYKGGLILIITVVILWVSSAEVTQGVFTDYKHPFAVTYLGTSLLVIYLPVAFIKNWL 60

Query: 61  CKMIXXXXXXXXXXXXXLNESSDGLNSPLSRKIFEMELQGTLSKKGSEADLSSQAEAKPL 120
            K+               N +S           FE E  G L  K    DLS +   KP+
Sbjct: 61  IKLWRHRPDTSGNKAGTANSASTN---------FENEHHGPLPSKECSIDLSPKESEKPV 111

Query: 121 VPRXXXX-----XXXXXXXXELTAREIATYGFYIAPIWFVTEYLSNAALARXXXXXXXXX 175
           V +                 +L A+E +  GF IAP+WF TEYL+NAALA+         
Sbjct: 112 VSQCNAKNNNNNVETLKVDKKLNAKETSLIGFSIAPLWFATEYLTNAALAKTSVASTTLL 171

Query: 176 XXXXXXXXXXIGVFLGQDTLNAAKVVAVFVSMAGVAMTTLGKTWAADDSQLSASINGKRS 235
                     IG  LG++++   K ++V +SM GVA+T +GKTW A  SQ  AS + K S
Sbjct: 172 SSTSCLFTLLIGALLGEESITFVKAISVVISMTGVALTLVGKTWIAGGSQSRASKDQKHS 231

Query: 236 LVGDLFGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLVWPLTALG 295
           L+GDL+ +LSA++YGLFTVLLK+FAGE GERVDVQKLFGYIGLF LVALWWLVWPLTA+G
Sbjct: 232 LIGDLYAVLSALTYGLFTVLLKRFAGE-GERVDVQKLFGYIGLFILVALWWLVWPLTAMG 290

Query: 296 IEPKFTIPHSAKVDEVVIANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADM 355
           IEP+F+ P SAK++E++I NGF+G+VL DYFW L V+WT+PLVA LG+SLTIPLAM+ DM
Sbjct: 291 IEPRFSFPQSAKMEEIIIINGFVGNVLCDYFWGLGVIWTSPLVAALGVSLTIPLAMLEDM 350

Query: 356 MIHGRHYSAIYILGSAQVFAGFVIANLSDWFSKK 389
           +IHG+HYSAIYI+GSAQVF GFVIANL+D  SKK
Sbjct: 351 VIHGQHYSAIYIIGSAQVFLGFVIANLADCISKK 384


>29848.m004510 conserved hypothetical protein
          Length = 401

 Score =  419 bits (1076), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/407 (55%), Positives = 271/407 (66%), Gaps = 21/407 (5%)

Query: 1   MSWRYKAGLFLISAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFLKDWI 60
           M WRY+AGL LI  VV+IWV SAEVTQ IF  YKQPFA+TY G SLMVVYLPIA +KDW 
Sbjct: 1   MGWRYQAGLGLIGTVVLIWVASAEVTQNIFEKYKQPFALTYFGVSLMVVYLPIALVKDWF 60

Query: 61  CKMIXXXXXXXXXXXXXLNESSDGLNSPLSRKIFEMELQGTLSKKGS---EADLSSQAEA 117
             ++              + SSDG    +  +I +M+       + S   + DLS + E 
Sbjct: 61  FGLVRTYLFKNKY-----SASSDGTGLDIPLRINDMQQAPENDMRSSLVTDKDLSEREEG 115

Query: 118 KPLVPRXXXXXXXXX-XXXELTAREIATYGFYIAPIWFVTEYLSNAALARXXXXXXXXXX 176
            P++ +             EL++ E+A    Y+AP+WF+TEYLSN+ALA           
Sbjct: 116 WPVIVKEEEEVSSLLEHHCELSSWEVAKCSLYLAPVWFITEYLSNSALANTSVASTTVLT 175

Query: 177 XXXXXXXXXIGVFLGQDTLNAAKVVAVFVSMAGVAMTTLGKTWAADDSQLSASINGKRSL 236
                     G  LGQD++NAAK+ AVF+SMAGVAMTT+GKTWAAD+  LS S   + S+
Sbjct: 176 STSALFTLFFGALLGQDSINAAKLAAVFISMAGVAMTTVGKTWAADE-MLSISETRRHSI 234

Query: 237 VGDLFGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLVWPLTALGI 296
            GD+FGL SA+SYGLFTVLLKK AG EGE+ DVQK FGYIGLFTL+ LWWL++PL A GI
Sbjct: 235 TGDIFGLFSAISYGLFTVLLKKCAGSEGEKADVQKFFGYIGLFTLLGLWWLLFPLQAAGI 294

Query: 297 EPKFTIPHSAKVDEVVIANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMM 356
           EP+FT P S  V E V+ N F+GSVLSDYFWAL VVWTTPLVATLGMSLTIPLAMVADM+
Sbjct: 295 EPQFTFPDSTFVGEEVLLNSFVGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMVADMV 354

Query: 357 IHGRHYSAIYILGS-----------AQVFAGFVIANLSDWFSKKLGL 392
           IHGRHYSAIYILG            AQVFAGF+IAN+SD FS K  L
Sbjct: 355 IHGRHYSAIYILGCTQWTSINQLCWAQVFAGFIIANISDKFSMKREL 401


>30204.m001770 conserved hypothetical protein
          Length = 430

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 165/399 (41%), Gaps = 28/399 (7%)

Query: 2   SWRYKAGLFLISAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIA----FLK 57
           +W +  GL  I AV  IW+ ++ V Q +      PF +TY+  SL V+Y+P+     +L+
Sbjct: 5   AWGWIVGLIYIFAVAAIWIAASFVVQSVVDAGVSPFLITYICNSLFVIYIPLVEIGRYLE 64

Query: 58  DWICKMIXXXXXXXXXXXXXLNESSDGL----------NSPLSRKIFEMELQGTLSKKGS 107
           D    +              L ES   +             L+  IF  E+  +    G 
Sbjct: 65  DHYGSLFFWRKTSSTSPLQELGESEQAILLGETDLGAKADELNPSIFIEEVNSSPHGNGV 124

Query: 108 EADLSSQAEAKPLVPRXXXXXXXXXXXXELTAREIATYGFYIAPIWFVTEYLSNAALARX 167
            A + S +     +                T   +A     I P WF  +   N +L   
Sbjct: 125 GAGVESMSSTLQRILPVGETGKGVDTKGRWTRARVAKVSLLICPFWFFAQLTFNLSLKYT 184

Query: 168 XXXXXXXXXXXXXXXXXXIGV-FLGQDTLNAAKVVAVFVSMAGVAMTTLGKTWAADDSQL 226
                             + + FLG+      K+ +V + MAG  + +LG      DS+ 
Sbjct: 185 TVTSNTILSTASSLFTFLVSLAFLGEK-FTWLKLASVLLCMAGTIIVSLG------DSKN 237

Query: 227 SASINGKRSLVGDLFGLLSAMSYGLFTVLLK-KFAGEEGE--RVDVQKLFGYIGLFTLVA 283
             S      L+GD F L+SA  Y  +  L++ KF  ++G+   V + +  GY+GLF L  
Sbjct: 238 GISAVASNPLLGDFFALISAGLYAAYITLIRLKFPDDDGKSGHVSMAQFLGYLGLFNLFL 297

Query: 284 LWWLVWPLTALGIEPKFTIPHSAKVDEVVIANGFIGSVLSDYFWALCVVWTTPLVATLGM 343
              +V  L    +EP   +  + K   +++  G + +VLSDY WA  V+ TT  VAT G+
Sbjct: 298 FLPVVLVLNFTMLEPFNML--TRKQFGLIVGKGLLDNVLSDYLWAKAVLLTTTTVATAGL 355

Query: 344 SLTIPLAMVADMMIHGRHYSAIYILGSAQVFAGFVIANL 382
           ++ +PLA + D +  G     +  LG+  V  GF   N+
Sbjct: 356 TIQVPLAAIVDTLT-GNAPRLMDYLGAIAVMIGFAGINI 393