Jatropha Genome Database

JcCA0141381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0141381.10 + phase: 1 /partial
         (220 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29158.m000192 proteasome subunit alpha type, putative                 432   e-122
29739.m003742 proteasome subunit alpha type, putative                 424   e-119
29602.m000220 proteasome subunit alpha type, putative                 142   9e-35
30147.m014437 proteasome subunit alpha type, putative                 139   1e-33
30147.m014436 proteasome subunit alpha type, putative                 138   2e-33
29308.m000179 proteasome subunit alpha type, putative                 137   6e-33
30169.m006319 proteasome subunit alpha type, putative                 134   5e-32
30170.m014069 proteasome subunit alpha type, putative                 127   6e-30
29977.m000262 proteasome subunit alpha type, putative                  85   2e-17

>29158.m000192 proteasome subunit alpha type, putative
          Length = 246

 Score =  432 bits (1110), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/217 (94%), Positives = 213/217 (98%)

Query: 3   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAAITSIGVRGKDSVCVVTQKKVPDKL 62
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKA+ +TSIGV GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKASGVTSIGVCGKDSVCVVTQKKVPDKL 60

Query: 63  LDQTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 122
           LD TSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRF+YGYEMPVDVLAKWIAD
Sbjct: 61  LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLAKWIAD 120

Query: 123 KSQVYTQHAYMRPLGVVAMVLGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLE 182
           KSQ+YTQHAYMRPLGVVAMVLGID+E GP+LYKCDPAGHF+GHKATSAGLKEQEAINFLE
Sbjct: 121 KSQIYTQHAYMRPLGVVAMVLGIDDEYGPRLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180

Query: 183 KKMKNDPAFSYEETVQTAISALQSILQEDFKATEIEV 219
           KKMKNDPAF+YEETVQTAISALQS+LQEDFKATEIEV
Sbjct: 181 KKMKNDPAFTYEETVQTAISALQSVLQEDFKATEIEV 217


>29739.m003742 proteasome subunit alpha type, putative
          Length = 246

 Score =  424 bits (1090), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/217 (96%), Positives = 216/217 (99%)

Query: 3   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAAITSIGVRGKDSVCVVTQKKVPDKL 62
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAA+TSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAAVTSIGVRGKDSVCVVTQKKVPDKL 60

Query: 63  LDQTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLAKWIAD 122
           LDQTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLA+WIAD
Sbjct: 61  LDQTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLARWIAD 120

Query: 123 KSQVYTQHAYMRPLGVVAMVLGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLE 182
           KSQVYTQHAYMRPLGV+AMVLGIDEENGPQLYKCDPAGHF+GHKATSAGLKEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVIAMVLGIDEENGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180

Query: 183 KKMKNDPAFSYEETVQTAISALQSILQEDFKATEIEV 219
           KKMKND AF+YEETVQTAISALQS+LQEDFKATEIEV
Sbjct: 181 KKMKNDRAFTYEETVQTAISALQSVLQEDFKATEIEV 217


>29602.m000220 proteasome subunit alpha type, putative
          Length = 249

 Score =  142 bits (359), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 5/211 (2%)

Query: 11  YDRHITIFSPEGRLFQVEYAFKAVKAAAITSIGVRGKDSVCVVTQKKVPDKLLDQTSVTH 70
           YDR IT+FSP+G LFQVEYA +AV+     ++GVRG D V +  +KK   KL D  +V  
Sbjct: 4   YDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDVVVLGVEKKSTAKLQDARTVRK 62

Query: 71  LFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVYTQH 130
           +  +  ++ L+  G+ ADAR L+ +AR E    R      + V+ + ++IA   Q YTQ 
Sbjct: 63  IVSLDNHVALVCAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQS 122

Query: 131 AYMRPLGVVAMVLGIDEENG-PQLYKCDPAGHFYGHKATSAGLKEQEAINFLEKKMKNDP 189
             +RP G+  +++G D   G P LY+ DP+G F   KA + G        FLEK  K   
Sbjct: 123 GGVRPFGLSTLIVGFDPYTGIPSLYQTDPSGAFSAWKANATGRNSNSMREFLEKNYKET- 181

Query: 190 AFSYEETVQTAISALQSILQEDFKATEIEVL 220
             S +ETV+ AI AL  +++   K  EI V+
Sbjct: 182 --SGQETVKLAIRALLEVVESGGKNIEIAVM 210


>30147.m014437 proteasome subunit alpha type, putative
          Length = 250

 Score =  139 bits (349), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 112/199 (56%), Gaps = 4/199 (2%)

Query: 11  YDRHITIFSPEGRLFQVEYAFKAVKAAAITSIGVRGKDSVCVVTQKKVPDKLLD-QTSVT 69
           YD   TIFSPEGRL+QVEYA +A+  A  T+IG+  KD   +V +KKV  KLL   TS  
Sbjct: 5   YDSRTTIFSPEGRLYQVEYAMEAIGNAG-TAIGILSKDGAVLVGEKKVTSKLLQTSTSTE 63

Query: 70  HLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVYTQ 129
            ++ I  ++     G+ +DA  L+  AR +A  + + Y   MPV+ L + + D  Q YTQ
Sbjct: 64  KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQ 123

Query: 130 HAYMRPLGVVAMVLGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLEKKMKNDP 189
              +RP GV  +  G D+  G QLY  DP+G++ G KA + G   Q A + L++  K+D 
Sbjct: 124 FGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKAAAVGANNQAAQSMLKQDYKDD- 182

Query: 190 AFSYEETVQTAISALQSIL 208
             + EE VQ A+  L   +
Sbjct: 183 -ITREEAVQLALKVLSKTM 200


>30147.m014436 proteasome subunit alpha type, putative
          Length = 250

 Score =  138 bits (347), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 112/199 (56%), Gaps = 4/199 (2%)

Query: 11  YDRHITIFSPEGRLFQVEYAFKAVKAAAITSIGVRGKDSVCVVTQKKVPDKLLD-QTSVT 69
           YD   TIFSPEGRL+QVEYA +A+  A  T+IG+  KD   +V +KKV  KLL   TS  
Sbjct: 5   YDSRTTIFSPEGRLYQVEYAMEAIGNAG-TAIGILSKDGAVLVGEKKVTSKLLQTSTSTE 63

Query: 70  HLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVYTQ 129
            ++ I  ++     G+ +DA  L+  AR +A  + + Y   MPV+ L + + D  Q YTQ
Sbjct: 64  KMYKIDDHVACAVAGIMSDANILINTARVQAQCYTYAYQEPMPVEQLVQSLCDTKQGYTQ 123

Query: 130 HAYMRPLGVVAMVLGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLEKKMKNDP 189
              +RP GV  +  G D+  G QLY  DP+G++ G KA + G   Q A + L++  K+D 
Sbjct: 124 FGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKAAAVGANNQAAQSMLKQDYKDD- 182

Query: 190 AFSYEETVQTAISALQSIL 208
             + EE VQ A+  L   +
Sbjct: 183 -ITREEAVQLALKVLSKTM 200


>29308.m000179 proteasome subunit alpha type, putative
          Length = 237

 Score =  137 bits (344), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 122/212 (57%), Gaps = 7/212 (3%)

Query: 11  YDRHITIFSPEGRLFQVEYAFKAVKAAAITSIGVRGKDSVCVVTQKKVPDKLLDQTSVTH 70
           YDR +  FSPEGRLFQVEYA +A+K  + T+IG++ K+ V +  +K++   LL+ +SV  
Sbjct: 8   YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGLKTKEGVVLAVEKRITSPLLEPSSVEK 66

Query: 71  LFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVY--- 127
           +  I +++G   +G+ ADARTLV+ AR E    RF YG  M V+   + + D +  +   
Sbjct: 67  VMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEG 126

Query: 128 TQHAYMRPLGVVAMVLGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLEKKMKN 187
            + +  RP GV  ++ G D ENGP LY  DP+G F+   A + G   + A + L+++   
Sbjct: 127 DEDSMSRPFGVSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNK 185

Query: 188 DPAFSYEETVQTAISALQSILQEDFKATEIEV 219
           D      ET+  A+S L+ +++E      +++
Sbjct: 186 DITLLEAETI--ALSILKQVMEEKVTPNNVDI 215


>30169.m006319 proteasome subunit alpha type, putative
          Length = 235

 Score =  134 bits (336), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 119/209 (56%), Gaps = 4/209 (1%)

Query: 11  YDRHITIFSPEGRLFQVEYAFKAVKAAAITSIGVRGKDSVCVVTQKKVPDKLLDQTSVTH 70
           Y   +T FSP G+L Q+E+A  AV +   TS+G++  + V + T+KK+P  L+D+ SV  
Sbjct: 6   YSFSLTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKAANGVVIATEKKLPSILVDEASVQK 64

Query: 71  LFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVYTQH 130
           +  +T  +G++ +GM  D R LV+++R +A ++   Y   +PV  L +  A   Q +TQ 
Sbjct: 65  IQTLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQS 124

Query: 131 AYMRPLGVVAMVLGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLEKKMKNDPA 190
             +RP GV  +V G D++ GPQLY+ DP+G ++  KA++ G     A  FLEK+  +D  
Sbjct: 125 GGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDD-- 181

Query: 191 FSYEETVQTAISALQSILQEDFKATEIEV 219
              ++ V TAI  L+   +       IE+
Sbjct: 182 MELDDAVHTAILTLKEGFEGQISGKNIEI 210


>30170.m014069 proteasome subunit alpha type, putative
          Length = 283

 Score =  127 bits (318), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 114/199 (57%), Gaps = 4/199 (2%)

Query: 11  YDRHITIFSPEGRLFQVEYAFKAVKAAAITSIGVRGKDSVCVVTQKKVPDKLLDQTSVTH 70
           YD  +T +SP GRLFQVEYA +AVK  +  +IG+R K  V +    K   +L   +    
Sbjct: 6   YDTDVTTWSPAGRLFQVEYAMEAVKQGS-AAIGLRSKTHVVLACVNKANSEL--SSHQKK 62

Query: 71  LFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVYTQH 130
           +F +  ++G+   G+TAD R L +  R+E   + F Y   +PV  L   +ADK+QV TQ 
Sbjct: 63  IFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSFTYESPLPVGRLVVQLADKAQVCTQR 122

Query: 131 AYMRPLGVVAMVLGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLEKKMKNDPA 190
           ++ RP GV  +V G+DE      Y C P+G+++ ++A + G + Q A  ++E++ +N   
Sbjct: 123 SWKRPYGVGLLVAGLDESGAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTYMERRFENFMD 181

Query: 191 FSYEETVQTAISALQSILQ 209
            S ++ ++ A+ A++  LQ
Sbjct: 182 SSRDDLIKDALIAVRETLQ 200


>29977.m000262 proteasome subunit alpha type, putative
          Length = 229

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 22/176 (12%)

Query: 8   GGGYDRHITIFSPEGRLFQVEYAFKAVKAAAITSIGVRGKDSVCVVTQKKVPDKLLDQTS 67
           G GYD  +T FSP+GR+FQ+EYA KAV  +  T IG++ KD + +  +K +  K++   S
Sbjct: 5   GTGYDLSVTTFSPDGRVFQIEYAAKAVDNSG-TVIGIKCKDGIVMGVEKLIASKMMLPGS 63

Query: 68  VTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVY 127
              +  + ++ G++                    E    YG  +PV  LA  +A    + 
Sbjct: 64  NRRIHAVHRHSGMV--------------------ERNCVYGEPIPVKELADRVASYVHLC 103

Query: 128 TQHAYMRPLGVVAMVLGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLEK 183
           T + ++RP G   ++LG  + +GPQLY  +P+G  Y +   + G  +Q A   +EK
Sbjct: 104 TLYWWLRPFG-CGVILGGYDRDGPQLYMVEPSGISYRYFGAAIGKGKQAAKTEIEK 158