Jatropha Genome Database

JcCA0140751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0140751.10 + phase: 0 
         (237 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30075.m001158 sphingolipid fatty acid alpha hydroxylase               272   1e-73

>30075.m001158 sphingolipid fatty acid alpha hydroxylase
          Length = 237

 Score =  272 bits (695), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 132/237 (55%), Positives = 163/237 (68%)

Query: 1   MCPKGFTVDLCKPHLFQVGYLGEHYDGWVHQPIITKESPRFFQSEILEWVTRSXXXXXXX 60
           M  +GFTVDL KP +FQVG+LGE Y+ WVHQPI+++E PRFF+S+  E++T +       
Sbjct: 1   MVAQGFTVDLNKPLVFQVGHLGEAYEEWVHQPIVSREGPRFFESDFWEFLTLTVWWAVPV 60

Query: 61  XXXXMACWCISISIRMGHSSSNVALMVVFGIFVWTFLEYLLHRFLFHFKTKTYWGNTIHY 120
               + CW +S+S+RMGH+ S +A MVV G+F+WT +EY +HRFLFH KT +YWGNTIHY
Sbjct: 61  IWLPVVCWLVSLSVRMGHTPSEIATMVVSGVFIWTLVEYTMHRFLFHIKTSSYWGNTIHY 120

Query: 121 LLHGLHHKFPMDRFRLVMPPLATAXXXXXXXXXXXXVGTPSTAPAVFGGTLLGYVIYDLT 180
           LLHG HHK PMD  RLV PP ATA              TPSTAPA+FGG LLGYV+YD T
Sbjct: 121 LLHGCHHKHPMDGLRLVFPPAATAVLCVPFWNLIKLFATPSTAPALFGGGLLGYVMYDCT 180

Query: 181 HYYLHHGQPSTXXXXXXXXXXXXXXFKVQDVGFGITSTLWDIVFGTLPPIQVIEKKE 237
           HYYLHHGQPS               F++Q +GFGITS+LWD VFGTLPP +V+ K  
Sbjct: 181 HYYLHHGQPSLGVPKDLKKYHMNHHFRLQTMGFGITSSLWDRVFGTLPPPKVVAKSR 237