Jatropha Genome Database

JcCA0140001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0140001.10 + phase: 0 /partial
         (268 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29693.m002052 starch synthase, putative                               501   e-142
29842.m003588 starch synthase, putative                               231   2e-61
28838.m000254 starch synthase, putative                               150   5e-37
30005.m001301 hypothetical protein                                    148   3e-36
30068.m002598 starch synthase, putative                               115   2e-26
29866.m000609 starch synthase, putative                               103   8e-23
28179.m000474 starch synthase, putative                                96   2e-20

>29693.m002052 starch synthase, putative
          Length = 998

 Score =  501 bits (1291), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 233/257 (90%), Positives = 246/257 (95%)

Query: 1   GGRGLHSTLNFHAKKFIGILNGIDTDSWNPMTDSFLKVQYSSNDLQGKTENKLAIRRHLG 60
           GGRGLHSTLNFHAKKFIGILNGIDTDSWNP TD+ LKVQYS+NDLQ K ENKLA RR LG
Sbjct: 732 GGRGLHSTLNFHAKKFIGILNGIDTDSWNPATDTCLKVQYSANDLQAKAENKLATRRLLG 791

Query: 61  LSTADAKRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVAHIQREFEGIAN 120
           LSTADA++PLVGCITRLVPQKGVHLIRHAIYRT+ELGGQF+LLGSSPVA IQREFEGIAN
Sbjct: 792 LSTADARQPLVGCITRLVPQKGVHLIRHAIYRTVELGGQFILLGSSPVAQIQREFEGIAN 851

Query: 121 HFQNHEHIRLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGL 180
           HFQNHEH+RLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGL
Sbjct: 852 HFQNHEHVRLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGL 911

Query: 181 NDSVFDVDDDAIPLQFRNGFTFLTPDEQGINGALERAFNYYRNNPEGWQELVQKDMNIDF 240
           NDSVFDVDD  IPLQF+NGFTFL PDEQGI+GALERAFNYYRNNPEGWQ+LVQKDMNIDF
Sbjct: 912 NDSVFDVDDVTIPLQFQNGFTFLNPDEQGISGALERAFNYYRNNPEGWQKLVQKDMNIDF 971

Query: 241 SWESSASQYEDLYANSV 257
           SWESSA+QYE+LY+ SV
Sbjct: 972 SWESSAAQYEELYSKSV 988


>29842.m003588 starch synthase, putative
          Length = 1095

 Score =  231 bits (590), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 125/255 (49%), Positives = 163/255 (63%), Gaps = 9/255 (3%)

Query: 6    HSTLNFHAKKFIGILNGIDTDSWNPMTDSFLKVQYSS-NDLQGKTENKLAIRRHLGLSTA 64
            +S +  H  KF GILNGID D W+P  D F+ V Y+S N ++GK   K A+++ LGL  A
Sbjct: 838  NSAIAPHLHKFHGILNGIDPDIWDPYNDKFIPVTYTSENVVEGKRAAKEALQQRLGLKKA 897

Query: 65   DAKRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVAHIQREFEGIAN--HF 122
            D   PL+G ITRL  QKG+HLI+HAI+RTL+  GQ VLLGS+P   IQ +F  +AN  H 
Sbjct: 898  DL--PLIGIITRLTHQKGIHLIKHAIWRTLDRNGQVVLLGSAPDPRIQNDFVNLANQLHS 955

Query: 123  QNHEHIRLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLND 182
             + +  RL L YD+ L+H IYA +D  ++PSIFEPCGLTQ+ AMRYGSIP+ RKTGGL D
Sbjct: 956  SHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYD 1015

Query: 183  SVFDVDDDAIPLQFR----NGFTFLTPDEQGINGALERAFNYYRNNPEGWQELVQKDMNI 238
            +VFDVD D    Q +    NGF+F   D  G + AL RA + + +    +  L +  M  
Sbjct: 1016 TVFDVDHDKERAQAQGLEPNGFSFDGADAAGTDYALNRAISAWYDGRGWFNSLCKTVMQQ 1075

Query: 239  DFSWESSASQYEDLY 253
            D+SW   A  Y +LY
Sbjct: 1076 DWSWNKPALDYMELY 1090


>28838.m000254 starch synthase, putative
          Length = 754

 Score =  150 bits (380), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 139/260 (53%), Gaps = 18/260 (6%)

Query: 1   GGRGLHSTLNFHAKKFIGILNGIDTDSWNPMTDSFLK----VQYSSNDLQ-GKTENKLAI 55
           GG GLH+ +N +  KF GI+NGIDT  WNP+ D  L       YS   L  GK++ K A+
Sbjct: 497 GGWGLHNIINENDWKFSGIVNGIDTKEWNPLCDVHLTSDGYTHYSLETLDTGKSQCKAAL 556

Query: 56  RRHLGLSTADAKRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSS--PVAHIQR 113
           ++ LGL       PL+G I RL  QKGV LI  AI   +    Q V+LG+    +  + R
Sbjct: 557 QKELGLPVR-PDVPLIGFIGRLDHQKGVDLIAEAIPWMMGQDVQLVMLGTGRPDLEQLLR 615

Query: 114 EFEGIANHFQNHEHIRLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPI 173
           +FE      Q+ + +R  + +    AH I A +D+ ++PS FEPCGL Q+ AM YG+IP+
Sbjct: 616 QFES-----QHSDKVRGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMTYGTIPV 670

Query: 174 ARKTGGLNDSVFDVDDDAIPLQFRN-GFTFLTPDEQGINGALERAFNYYRNNPEGWQELV 232
               GGL D+V   D    P      G+TF + +   +  AL      YR   + W+ L 
Sbjct: 671 VHAVGGLRDTVQPFD----PFNESGLGWTFDSAEANKLIHALGNCLLSYREYKKSWEGLQ 726

Query: 233 QKDMNIDFSWESSASQYEDL 252
           ++ M  D SW+ +A +YE++
Sbjct: 727 RRGMMQDLSWDHAAEKYEEV 746


>30005.m001301 hypothetical protein
          Length = 190

 Score =  148 bits (373), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 69/81 (85%), Positives = 74/81 (91%)

Query: 1   GGRGLHSTLNFHAKKFIGILNGIDTDSWNPMTDSFLKVQYSSNDLQGKTENKLAIRRHLG 60
           GGRGLHSTLNFHAKKFIGILNGIDTDSWNP+TD+ LKVQY +NDLQGK ENKL  RR LG
Sbjct: 77  GGRGLHSTLNFHAKKFIGILNGIDTDSWNPVTDTCLKVQYGANDLQGKAENKLPTRRLLG 136

Query: 61  LSTADAKRPLVGCITRLVPQK 81
           LSTADA++PL GCITRLVPQK
Sbjct: 137 LSTADARQPLEGCITRLVPQK 157


>30068.m002598 starch synthase, putative
          Length = 526

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 5/168 (2%)

Query: 18  GILNGIDTDSWNPMTDSFLKVQYSSNDL-QGKTENKLAIRRHLGLSTADAKRPLVGCITR 76
           GI+NG+D   WNP TD ++ + Y +  + + K   K A++  +GL   D   PL+G I R
Sbjct: 291 GIINGMDVQEWNPATDKYIGINYDATTVTEAKPLLKEALQAEVGLPV-DRNIPLIGFIGR 349

Query: 77  LVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVAHIQREFEGIANHFQNHEHIRLILKYDD 136
           L  QKG  ++  AI +  +   Q V+LG+   A  +++ E +   +   +  R + K++ 
Sbjct: 350 LEEQKGSDILVAAISQLAKYNVQIVILGTGKKA-FEKQIEQLEVLYP--DKCRGVAKFNV 406

Query: 137 SLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSV 184
            LAH I A +D  +IPS FEPCGL Q+ AMRYG++PI   TGGL D+V
Sbjct: 407 PLAHMIIAGADFMLIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 454


>29866.m000609 starch synthase, putative
          Length = 624

 Score =  103 bits (257), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 25/259 (9%)

Query: 16  FIGILNGIDTDSWNPMTDSFLKVQYSSNDLQ-GKTENKLAIRRHLGLSTADAKRPLVGCI 74
            IGI+NG+D   WNP TD ++ V++ +  +   K   K A++  +GL   D   P++G I
Sbjct: 346 IIGIVNGMDVQEWNPSTDKYINVKFDATTVTDAKPLLKEALQAEVGLPV-DRNIPVIGFI 404

Query: 75  TRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVAHIQREFEGIANHFQNHEHIRLILKY 134
            RL  QKG  ++  AI   ++   Q ++LG+    H++ +   +   + +    R   K+
Sbjct: 405 GRLEEQKGSDILAAAIPYFIQENVQIIILGTGK-KHMEEQIMQLETLYPSKA--RGAAKF 461

Query: 135 DDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSV----FDVDDD 190
           +  LAH I A +D  ++PS FEPCGL Q+ AMRYG++     T   N  V    F +   
Sbjct: 462 NVPLAHMIIAGADFILVPSRFEPCGLIQLHAMRYGTVRPLSSTPHFNSKVASEMFQLLLQ 521

Query: 191 AIPL-QFRNGFTFL-------------TPDEQGINGALERAFNYYRNNPEGWQELVQKDM 236
            + L   + G+T                 D   +   ++RA   +        E++Q  M
Sbjct: 522 LVDLWTLKEGYTGFQMGAFSVECDKVDPEDAIAVAKTVKRALAVH--GTRALVEMIQNGM 579

Query: 237 NIDFSWESSASQYEDLYAN 255
             D SW+  A ++E L  N
Sbjct: 580 RQDLSWKGPAKKWEKLLLN 598


>28179.m000474 starch synthase, putative
          Length = 720

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 3/173 (1%)

Query: 2   GRGLHSTLNFHAKKFIGILNGIDTDSWNPMTDSFLKVQYSSNDLQGKTENKLAIRRHLGL 61
             GL  TL+ H  K +    G D  +W+P  D FL   YS +D++GKT  ++A+++++GL
Sbjct: 440 SHGLGPTLSIHQDKLLVTPYGFDKSTWDPSKDRFLPENYSKDDMKGKTVCRVALQQYVGL 499

Query: 62  STADAKRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVAHIQREFEGIANH 121
           S  +    LVGCI   +    V  ++  ++       QF+ +GS  ++   R  E +   
Sbjct: 500 SN-NTSVVLVGCILSELSDFNVDSLKAVVWNATRNNVQFIFMGSKMLS-ANRALESLQKE 557

Query: 122 FQNHEHIRLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIA 174
            ++ E++R I KY + L+H I+A SD+ +  S  +P     + A++YG+ P+A
Sbjct: 558 LKS-ENVRFISKYKEVLSHLIFAGSDIILCLSFHDPFLQVPLKALKYGAAPVA 609