Jatropha Genome Database
- JcCA0139601.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0139601.10 - phase: 0
(61 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008934 mads box protein, putative 107 1e-24
30147.m014133 mads box protein, putative 100 2e-22
29908.m005982 mads box protein, putative 99 5e-22
30170.m013776 mads box protein, putative 95 8e-21
29596.m000699 mads box protein, putative 94 1e-20
30138.m003939 mads box protein, putative 93 3e-20
29838.m001690 mads box protein, putative 90 2e-19
29648.m001978 mads box protein, putative 88 8e-19
29804.m001536 mads box protein, putative 87 2e-18
29907.m000663 mads box protein, putative 87 2e-18
30221.m002218 mads box protein, putative 85 8e-18
29782.m000119 Floral homeotic protein DEFICIENS, putative 83 3e-17
30138.m004061 mads box protein, putative 77 2e-15
29693.m002039 mads box protein, putative 73 3e-14
28348.m000077 mads box protein, putative 69 3e-13
29813.m001508 mads box protein, putative 67 1e-12
27866.m000233 mads box protein, putative 64 1e-11
30099.m001672 mads box protein, putative 64 2e-11
29613.m000367 mads box protein, putative 64 2e-11
29693.m002042 mads box protein, putative 62 6e-11
29838.m001672 mads box protein, putative 62 7e-11
29693.m002041 mads box protein, putative 60 2e-10
30099.m001671 mads box protein, putative 60 2e-10
29739.m003627 mads box protein, putative 58 8e-10
28830.m000229 mads box protein, putative 57 1e-09
29912.m005524 mads box protein, putative 54 1e-08
29653.m000299 mads box protein, putative 51 1e-07
27893.m000228 mads box protein, putative 50 2e-07
30190.m010925 conserved hypothetical protein 49 6e-07
28180.m000391 mads box protein, putative 47 2e-06
>30174.m008934 mads box protein, putative
Length = 244
Score = 107 bits (267), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/59 (83%), Positives = 55/59 (93%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ N
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGN 59
>30147.m014133 mads box protein, putative
Length = 213
Score = 100 bits (248), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 56/61 (91%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
M RGKI+++RIEN T+RQVTF KRRNGLLKKAYELSVLCDAEVA+I+FS +GRL E+++N
Sbjct: 1 MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLSEFASN 60
Query: 61 K 61
+
Sbjct: 61 E 61
>29908.m005982 mads box protein, putative
Length = 347
Score = 98.6 bits (244), Expect = 5e-22, Method: Composition-based stats.
Identities = 45/61 (73%), Positives = 52/61 (85%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
MGR K+EIKRIENTTNRQVTF KRRNGL+KKAYELS+LCD ++ALI+FS GRL +S
Sbjct: 1 MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFSGR 60
Query: 61 K 61
K
Sbjct: 61 K 61
>30170.m013776 mads box protein, putative
Length = 230
Score = 94.7 bits (234), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 51/58 (87%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS 58
MGR K++IKRIENTTNRQVTF KRRNGL+KKAYELSVLCD +VALI+FS GRL +S
Sbjct: 1 MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRLSLFS 58
>29596.m000699 mads box protein, putative
Length = 262
Score = 94.0 bits (232), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 53/58 (91%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS 58
MGRGKI I+RI+N+T+RQVTF KRRNGLLKKA EL++LCDAEV +++FSS G+LY++S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLYDFS 58
>30138.m003939 mads box protein, putative
Length = 244
Score = 93.2 bits (230), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/60 (73%), Positives = 55/60 (91%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
MGRG++++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEVALIVFS++G+L+EYS +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
>29838.m001690 mads box protein, putative
Length = 61
Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 52/61 (85%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
M R KI+IK+I+N T RQVTF KRR GL KKAYELS LCDAE+AL+VFS+ G+L+EY+++
Sbjct: 1 MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFSATGKLFEYASS 60
Query: 61 K 61
+
Sbjct: 61 R 61
>29648.m001978 mads box protein, putative
Length = 234
Score = 88.2 bits (217), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/57 (70%), Positives = 54/57 (94%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 57
MGRG+IEIKRIEN++NRQVT+ KRRNG++KKA E++VLCDAEV+LI+F+S G+++EY
Sbjct: 1 MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFASSGKMHEY 57
>29804.m001536 mads box protein, putative
Length = 266
Score = 86.7 bits (213), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/59 (71%), Positives = 53/59 (89%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
MGRGKI I+RI+N+T+RQVTF KRRNGLLKKA ELS+LCDAEV +I+FSS +LY+Y++
Sbjct: 28 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLYDYAS 86
>29907.m000663 mads box protein, putative
Length = 205
Score = 86.7 bits (213), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/58 (67%), Positives = 50/58 (86%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS 58
M RGK+++KRIEN +RQVTFCKRR+GLLKKA ELSVLCDAE+ L +FS+ G+LY+ +
Sbjct: 1 MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFSAHGKLYDLA 58
>30221.m002218 mads box protein, putative
Length = 233
Score = 84.7 bits (208), Expect = 8e-18, Method: Composition-based stats.
Identities = 41/57 (71%), Positives = 48/57 (84%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 57
MGRGKI IKRIEN T RQVTF KRR GLLKK +ELSVLCDA++ LI+FSS G++ +Y
Sbjct: 1 MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQY 57
>29782.m000119 Floral homeotic protein DEFICIENS, putative
Length = 235
Score = 83.2 bits (204), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLY 55
MGRGKIEIK+IEN TNRQVT+ KRRNG+ KKA EL+VLCDA+V+LI+FS+ GR +
Sbjct: 1 MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNSGRKF 55
>30138.m004061 mads box protein, putative
Length = 363
Score = 77.0 bits (188), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 45/53 (84%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR 53
MGR K++IKR+E+T+NRQVT+ KRRNG+LKKA ELS+LCD + L++FS G+
Sbjct: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFSPTGK 53
>29693.m002039 mads box protein, putative
Length = 172
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
MGR KIE+K +++T++RQVTF KRR GL KKA EL+ LC A++A++VFS G+ + + +
Sbjct: 1 MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSFGH 59
>28348.m000077 mads box protein, putative
Length = 215
Score = 69.3 bits (168), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
GR KIEIK++EN R VTF KR++G+ KKA ELS LC AE+A+++FS G+++ N
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVFSCGN 74
>29813.m001508 mads box protein, putative
Length = 360
Score = 67.4 bits (163), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 43/53 (81%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR 53
MGR K++IK++ENT RQ T+ KR++G++KKA ELS+LCD ++ L++FS G+
Sbjct: 1 MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGK 53
>27866.m000233 mads box protein, putative
Length = 217
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
GR KIEIK IE +N QVTF KRR GL KKA ELS+LC A+VA++ FS +++ + +
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVFAFGH 70
>30099.m001672 mads box protein, putative
Length = 217
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
GR KI++ ++ N +N QVTF KRR+GL KKA ELS LC AE+A+IVFS +++ + +
Sbjct: 7 GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSFGH 64
>29613.m000367 mads box protein, putative
Length = 183
Score = 63.5 bits (153), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
+GR KI I++I ++ QVTF KRR GL KKA EL LC E+A+IVFS G+ + + +
Sbjct: 6 LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAFSFGH 64
>29693.m002042 mads box protein, putative
Length = 220
Score = 62.0 bits (149), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 41/58 (70%)
Query: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
GR KI +KRIEN +R +TF KRR+G+ KKA EL LC AEV ++VFS G+ + + +
Sbjct: 9 GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPFSFGH 66
>29838.m001672 mads box protein, putative
Length = 207
Score = 61.6 bits (148), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
GR +IE+ +I +NR VTF KRR G+ KKA ELS LC AE+++IVFS R + + N
Sbjct: 8 GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAFSFGN 65
>29693.m002041 mads box protein, putative
Length = 239
Score = 60.5 bits (145), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
GR KIE+K+IEN +R +TF KRR+G+ KKA EL L AE+A +V+S G+ + +++
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPFSFAH 69
>30099.m001671 mads box protein, putative
Length = 226
Score = 60.1 bits (144), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
+GR KI I++I T+ QVTF KRR GL KKA EL LC E+A++VFS + + + +
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAFSFGH 84
>29739.m003627 mads box protein, putative
Length = 62
Score = 58.2 bits (139), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
MGR K++I R+E+ RQV + KR+ G+LKK EL+ LCD ++ LI+FS G+ Y +
Sbjct: 1 MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGKPSLYVGH 60
>28830.m000229 mads box protein, putative
Length = 197
Score = 57.4 bits (137), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59
MGR K ++ I+ + RQV+F KRR G+ KKA EL LC E A+++FS G+ + + +
Sbjct: 1 MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAFTFGH 59
>29912.m005524 mads box protein, putative
Length = 338
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 51
MGRGK+ ++ I N +R +T+ KR+ GL KK E +LCD + +I+FS +
Sbjct: 1 MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFSPK 51
>29653.m000299 mads box protein, putative
Length = 166
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 5 KIEIKRI-ENTTNRQVTFCKRRNGLLKKAYELSVL--CDAEVALIVFSSRGRLYEY 57
KIEIK+I +N T VTF KRR GL KKA E L AEVALI FS GR + +
Sbjct: 29 KIEIKKIQDNKTGLIVTFSKRRTGLFKKAMEFCNLDGGGAEVALITFSPSGRPFSF 84
>27893.m000228 mads box protein, putative
Length = 349
Score = 50.1 bits (118), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 5 KIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS 49
K +K++E+ R V+F KRRNGL KA EL +LCDA++A++V S
Sbjct: 6 KRPMKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVAS 50
>30190.m010925 conserved hypothetical protein
Length = 386
Score = 48.5 bits (114), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR 53
MG +I+++ IE + R +T+ KR+ L+KK E S+LC E LI+F+ + +
Sbjct: 1 MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFAPKHK 53
>28180.m000391 mads box protein, putative
Length = 328
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 5 KIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR 53
K+ +K+ E R V+F KRR GL KA EL +LCDA++AL+V S R
Sbjct: 6 KLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSSPCSR 54