Jatropha Genome Database

JcCA0139011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0139011.10 - phase: 0 /pseudo/partial
         (244 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29991.m000627 dtdp-glucose 4-6-dehydratase, putative                  337   2e-93
29585.m000578 dtdp-glucose 4-6-dehydratase, putative                   63   1e-10
27917.m000092 dtdp-glucose 4-6-dehydratase, putative                   60   1e-09
29876.m000257 dtdp-glucose 4-6-dehydratase, putative                   59   2e-09

>29991.m000627 dtdp-glucose 4-6-dehydratase, putative
          Length = 373

 Score =  337 bits (865), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/193 (85%), Positives = 173/193 (89%), Gaps = 9/193 (4%)

Query: 1   DPAYYILKEDESPCIFGPIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 60
           DPAYYILKEDESPCIFG IEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR
Sbjct: 144 DPAYYILKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 203

Query: 61  MDFIPGIDGPSEGVPRVLACFSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 120
           MDFIPGIDGPSEGVPRVLACFSNALLR EPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP
Sbjct: 204 MDFIPGIDGPSEGVPRVLACFSNALLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 263

Query: 121 ARASGHIFNVGNPHNEVTVRQLAEMMTEVYSKVSGEAALDVPTVDISSKGIF-------- 172
           ARA+GHIFNVGNPHNEVTV+QLAEMMTEVYSKVSGE  L+VPTVDISSK  +        
Sbjct: 264 ARANGHIFNVGNPHNEVTVKQLAEMMTEVYSKVSGEPVLEVPTVDISSKEFYGEGYDDSD 323

Query: 173 -MVRDMMIVTKEF 184
             + DM I+ ++ 
Sbjct: 324 KRIPDMTIINRQL 336


>29585.m000578 dtdp-glucose 4-6-dehydratase, putative
          Length = 346

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  I R FN  GPRM+   G         RV++ F 
Sbjct: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFI 223

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              +R EPL +   G   R+F Y+ D ++ ++ ++E     +G I N+GNP  E T+ +L
Sbjct: 224 AQAVRNEPLTVQAPGTQTRSFCYVSDMVDGLIRLME--GENTGPI-NIGNP-GEFTMLEL 279

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 280 AETVKEL 286


>27917.m000092 dtdp-glucose 4-6-dehydratase, putative
          Length = 369

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 21/132 (15%)

Query: 22  QRWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 79
           +R  Y   K+  E L   Y  GA+  +E  I R FN  GPRM    G         RV++
Sbjct: 191 ERSCYDEGKRTAETLTMDYHRGAD--VEVRIARIFNTYGPRMCLDDG---------RVVS 239

Query: 80  CFSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHI--FNVGNPHNEV 137
            F    +R++PL +   G+  R+F Y+ D ++ ++ ++E     S H+  FN+GNP  E 
Sbjct: 240 NFVAQAIRKQPLTVYGDGKQTRSFQYVSDLVDGLVALME-----SEHVGPFNLGNP-GEF 293

Query: 138 TVRQLAEMMTEV 149
           T+ +LAE++ E 
Sbjct: 294 TMLELAEVVKET 305


>29876.m000257 dtdp-glucose 4-6-dehydratase, putative
          Length = 346

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  I R FN  GPRM+   G         RV++ F 
Sbjct: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFI 223

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              LR E L +   G   R+F Y+ D +  ++ ++E     +G I N+GNP  E T+ +L
Sbjct: 224 AQALRGEALTVQKPGTQTRSFCYVSDMVYGLIRLME--GENTGPI-NIGNP-GEFTMIEL 279

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 280 AETVKEL 286