Jatropha Genome Database

JcCA0136721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0136721.10 - phase: 0 
         (256 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29739.m003715 groes chaperonin, putative                              462   e-131
29816.m000688 groes chaperonin, putative                               55   3e-08

>29739.m003715 groes chaperonin, putative
          Length = 253

 Score =  462 bits (1188), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/256 (89%), Positives = 246/256 (96%), Gaps = 3/256 (1%)

Query: 1   MATAQLTASSISVTARNLASFEGLRPSTVKFASFGNLKAAGLSQRSFRGLVVKAATVVAP 60
           MATAQLTASS+S++ARNL SFEGLRPSTVKFAS   LKA GLSQRSFR LVVKAATVVAP
Sbjct: 1   MATAQLTASSVSLSARNLTSFEGLRPSTVKFAS---LKAGGLSQRSFRSLVVKAATVVAP 57

Query: 61  KYTSIKPLGDRVLVKIKVAEEKTEGGILLPTTAQSKPQGGEVVAVGEGKTIGKTKLDISV 120
           KYTSIKPLGDRVL+KIKVAEEKT+GGILLPT+AQ+KPQGGEVVAVGEG+TIGK KLDISV
Sbjct: 58  KYTSIKPLGDRVLLKIKVAEEKTDGGILLPTSAQTKPQGGEVVAVGEGRTIGKNKLDISV 117

Query: 121 KTGAQVIYSKYAGTEVEFNGSPHLILKEDDIVGVLETDDIKDLKPCNDRVFIKVAEAEEK 180
           KTGAQV+YSKYAGTEVEFNGS HLILKEDDIVGVLETDDIKDLKP NDRVFIK+A+AEEK
Sbjct: 118 KTGAQVVYSKYAGTEVEFNGSSHLILKEDDIVGVLETDDIKDLKPLNDRVFIKIADAEEK 177

Query: 181 TAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSITPGNTVLYSKYAGNDFKGSDG 240
           TAGGLLLTEA+KEKPSIGTVIAVGPG LDEEGNR+PLS++PGN+VLYSKYAGNDFKGSDG
Sbjct: 178 TAGGLLLTEATKEKPSIGTVIAVGPGTLDEEGNRRPLSVSPGNSVLYSKYAGNDFKGSDG 237

Query: 241 TNYIALRASDVMAVLS 256
           TNYIALRASDVMAVLS
Sbjct: 238 TNYIALRASDVMAVLS 253


>29816.m000688 groes chaperonin, putative
          Length = 97

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 2/96 (2%)

Query: 161 KDLKPCNDRVFIKVAEAEEKTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIT 220
           + L P  +RV ++      KT GG+LL E+S +  S G VI+VGPG    EG   P S+ 
Sbjct: 3   RRLIPTLNRVLVEKILPPSKTTGGILLPESSTKLNS-GKVISVGPGLRSNEGKTIPTSVK 61

Query: 221 PGNTVLYSKYAGNDFKGSDGTNYIALRASDVMAVLS 256
            G+TVL  +Y G   K  D   Y   R  D++  L 
Sbjct: 62  EGDTVLLPEYGGTQVKLGD-KEYFLYRDEDILGTLH 96



 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 12/96 (12%)

Query: 67  PLGDRVLVKIKVAEEKTEGGILLPTTAQSKPQGGEVVAVG------EGKTIGKTKLDISV 120
           P  +RVLV+  +   KT GGILLP ++ +K   G+V++VG      EGKTI       SV
Sbjct: 7   PTLNRVLVEKILPPSKTTGGILLPESS-TKLNSGKVISVGPGLRSNEGKTI-----PTSV 60

Query: 121 KTGAQVIYSKYAGTEVEFNGSPHLILKEDDIVGVLE 156
           K G  V+  +Y GT+V+     + + +++DI+G L 
Sbjct: 61  KEGDTVLLPEYGGTQVKLGDKEYFLYRDEDILGTLH 96