Jatropha Genome Database

JcCA0136621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0136621.10 - phase: 0 /partial
         (264 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29648.m002007 8-oxoguanine DNA glycosylase, putative                  316   6e-87

>29648.m002007 8-oxoguanine DNA glycosylase, putative
          Length = 412

 Score =  316 bits (810), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 144/181 (79%), Positives = 167/181 (92%)

Query: 64  ISSTNWAPLGLIQAELFLPLTFPTGQTFRWKQTGPFQYTGTLGPHLISLKNHHENGNVYY 123
           I++TNW  L L Q+EL LPLTFPTGQTFRWKQTG  QYTGTLGPHLISLK+HH+NGNVYY
Sbjct: 44  ITTTNWNALNLTQSELSLPLTFPTGQTFRWKQTGHHQYTGTLGPHLISLKHHHQNGNVYY 103

Query: 124 HIHRSPSESAAKSALLDFLNIDISLTDMWAEFSVSDSRFSELARHLQGARVLRQDPLECL 183
           HIH +PSE+AAKSALLDFLNI++SL ++WA+FS SDSRF+ELA HL+GARVLRQDPLECL
Sbjct: 104 HIHTTPSETAAKSALLDFLNINVSLANIWADFSASDSRFAELAMHLKGARVLRQDPLECL 163

Query: 184 IQFLCSSNNNIARITKMVDFISSLGEHLGNVEGFDFHEFPSLERLAMITEQQLREAGFGY 243
           IQFLCSSNNNIARITKMVD++SSLG++LGNVEGF+F+EFP LERL ++TE+QLR AGFGY
Sbjct: 164 IQFLCSSNNNIARITKMVDYVSSLGQYLGNVEGFEFYEFPDLERLGLVTEEQLRAAGFGY 223

Query: 244 R 244
           R
Sbjct: 224 R 224