Jatropha Genome Database

JcCA0134821.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0134821.20 + phase: 2 /partial
         (262 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006063 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl...   541   e-154
29772.m000321 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl...   498   e-142
27940.m000333 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl...   483   e-137

>29908.m006063 Phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplast precursor, putative
          Length = 535

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 255/262 (97%), Positives = 259/262 (98%)

Query: 1   YKELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 60
           Y+ELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDS SGLYYDC
Sbjct: 274 YRELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSISGLYYDC 333

Query: 61  SAHFLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITI 120
           SAHFLW GERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITI
Sbjct: 334 SAHFLWAGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITI 393

Query: 121 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAF 180
           ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFD+IRAEVRAF
Sbjct: 394 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAF 453

Query: 181 FDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF 240
           FDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF
Sbjct: 454 FDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF 513

Query: 241 IIAERLRKRRIKSQPSIAPISL 262
           IIAERLRKRRIKSQP IAP+SL
Sbjct: 514 IIAERLRKRRIKSQPPIAPLSL 535


>29772.m000321 Phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplast precursor, putative
          Length = 533

 Score =  498 bits (1283), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 231/254 (90%), Positives = 244/254 (96%)

Query: 1   YKELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 60
           Y+ELAHRVDEALGFM+A GLTV+HP+MTTTEFWTSHECL LPYEQ+LTRLDSTSGLYYDC
Sbjct: 273 YQELAHRVDEALGFMAATGLTVEHPVMTTTEFWTSHECLHLPYEQALTRLDSTSGLYYDC 332

Query: 61  SAHFLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITI 120
           SAH LW GERTRQLDGAH+EFLRG++NPLGIKVS+KMDPNELVKLIEILNP NKPGRITI
Sbjct: 333 SAHMLWCGERTRQLDGAHMEFLRGISNPLGIKVSNKMDPNELVKLIEILNPNNKPGRITI 392

Query: 121 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAF 180
           I RMGAENMRVKLPHLIRAVRRAGQIVTWV DPMHGNTIKAPCGLKTRPFD+I AEVRAF
Sbjct: 393 ICRMGAENMRVKLPHLIRAVRRAGQIVTWVCDPMHGNTIKAPCGLKTRPFDAILAEVRAF 452

Query: 181 FDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF 240
           FDVH+QEGSHPGG+HLEMTGQNVTECIGGSRTVTFDDL SRYHTHCDPRLNASQSLELAF
Sbjct: 453 FDVHEQEGSHPGGIHLEMTGQNVTECIGGSRTVTFDDLGSRYHTHCDPRLNASQSLELAF 512

Query: 241 IIAERLRKRRIKSQ 254
           IIAERLRKRRI +Q
Sbjct: 513 IIAERLRKRRIGTQ 526


>27940.m000333 Phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplast precursor, putative
          Length = 518

 Score =  483 bits (1242), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 223/257 (86%), Positives = 243/257 (94%)

Query: 1   YKELAHRVDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDC 60
           Y ELA RVDEALGFM+AAGLTVDHP+M TTEFWTSHECL LPYEQ+LTR DST+GLYYDC
Sbjct: 252 YMELARRVDEALGFMAAAGLTVDHPVMNTTEFWTSHECLHLPYEQALTREDSTTGLYYDC 311

Query: 61  SAHFLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITI 120
           SAH LWVGERTRQLDGAHVEFLRGV+NPLGIKVSDKMDP ELVKL EILNP N+PGR+TI
Sbjct: 312 SAHMLWVGERTRQLDGAHVEFLRGVSNPLGIKVSDKMDPKELVKLCEILNPHNRPGRLTI 371

Query: 121 ITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAF 180
           I RMGA+N+R+KLPHLIRAVR+AG IVTWVSDPMHGNTIKAPCGLKTRPFDSIRAE+RAF
Sbjct: 372 IARMGADNLRIKLPHLIRAVRQAGLIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAELRAF 431

Query: 181 FDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAF 240
           FDVHDQEGS+PGGVHLEMTGQNVTEC+GGS+TVTFDDL+SRYHTHCDPRLNASQSLELAF
Sbjct: 432 FDVHDQEGSYPGGVHLEMTGQNVTECVGGSKTVTFDDLNSRYHTHCDPRLNASQSLELAF 491

Query: 241 IIAERLRKRRIKSQPSI 257
            IAERLR++R++S  SI
Sbjct: 492 AIAERLRRKRLRSGGSI 508