Jatropha Genome Database

JcCA0133521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0133521.10 + phase: 0 /partial
         (263 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30075.m001171 3-hydroxyisobutyrate dehydrogenase, putative            391   e-109
30005.m001255 3-hydroxyisobutyrate dehydrogenase, putative            100   6e-22
29706.m001350 3-hydroxyisobutyrate dehydrogenase, putative             99   2e-21
30071.m000444 3-hydroxyisobutyrate dehydrogenase, putative             84   6e-17
29912.m005435 3-hydroxyisobutyrate dehydrogenase, putative             65   3e-11
60395.m000025 3-hydroxyisobutyrate dehydrogenase, putative             58   5e-09

>30075.m001171 3-hydroxyisobutyrate dehydrogenase, putative
          Length = 388

 Score =  391 bits (1004), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/264 (76%), Positives = 217/264 (82%), Gaps = 15/264 (5%)

Query: 1   MAILYRVRGVLSIFNTKLYASIRGFSTSPPFS----------QFENVGFIGLGNMGSRMA 50
           MA+  RVR +LS   T        FS S P            QFENVGFIGLGNMGSRMA
Sbjct: 40  MAMYCRVRSLLSSVRTN-----SSFSISVPMHSFSTSPASSSQFENVGFIGLGNMGSRMA 94

Query: 51  NNLIKAGYKVTVHDINHNVIKMFTDMGVPSKQTPFEVAEASDVVITMLPSTSHVLDVYTG 110
            NLIKAGYKV VHDIN NVIKMFTDMGV +K+TP EVAEAS++VITMLPSTSHVLDVY G
Sbjct: 95  QNLIKAGYKVAVHDINCNVIKMFTDMGVSTKETPLEVAEASNIVITMLPSTSHVLDVYNG 154

Query: 111 PNGLLYGGNIVRPRLLINSSTIDPETSRKLSATVSNFVLTEKKDQWEKPVMLDAPVSGGV 170
           PNGLL GG  +RP+L INSSTIDPETSRKLSA VSNFV+ EK   WEKP+MLDAPVSGGV
Sbjct: 155 PNGLLQGGTFLRPQLFINSSTIDPETSRKLSAAVSNFVVKEKTGNWEKPLMLDAPVSGGV 214

Query: 171 LAAEAGTLTFMVGGCEEAYLAAKSLFLSMGKNSIYCGGAGTGSAAKICNNLAMAVSMIGV 230
           LAAEAGTLTFMVGG ++AYLAAK LFLSMGK++IYCGGAGTGSAAKICNNLAMAVSM+GV
Sbjct: 215 LAAEAGTLTFMVGGSKDAYLAAKPLFLSMGKSTIYCGGAGTGSAAKICNNLAMAVSMLGV 274

Query: 231 SEALALGQSLGIRADPLSKVFNSS 254
           SEALALGQSLGI AD L+KVFNSS
Sbjct: 275 SEALALGQSLGIDADTLTKVFNSS 298


>30005.m001255 3-hydroxyisobutyrate dehydrogenase, putative
          Length = 289

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 104/211 (49%), Gaps = 14/211 (6%)

Query: 36  NVGFIGLGNMGSRMANNLIKAGYKVTVHDINHNVIKMFTDMGVPSKQTPFEVAEASDVVI 95
            VGF+GLG MG  MA NLIK+G+KVTV +   +      ++G    ++P  V +     I
Sbjct: 2   EVGFLGLGIMGKAMATNLIKSGFKVTVWNRTLSKCSELVNLGASIGESPAAVVKKCKTTI 61

Query: 96  TMLPSTSHVLDVYTGPNGLLYGGNIVRPRLLINSSTIDPETSRKLSATVSNFVLTEKKDQ 155
            M+   +  L V    +G+L    I   +  I+ ST+ PETS K+S+ +     T K   
Sbjct: 62  AMISDPAAALSVAFDKDGVLE--EICSGKGYIDMSTVSPETSIKISSAI-----TAKGGS 114

Query: 156 WEKPVMLDAPVSGGVLAAEAGTLTFMVGGCEEAYLAAKSLFLSMGKNSIYCGGAGTGSAA 215
           +     L+APVSG    AEAG L  +  G +  Y AA   F  MGK S + G  G G+  
Sbjct: 115 F-----LEAPVSGSKQPAEAGQLVILAAGDKALYDAAIPAFDVMGKKSFFLGEVGNGAKM 169

Query: 216 KICNNLAMAVSMIGVSEALALGQSLGIRADP 246
           K+  N+ M   M   SE L L +  G+  DP
Sbjct: 170 KLVVNMIMGSMMNAFSEGLVLAEKSGL--DP 198


>29706.m001350 3-hydroxyisobutyrate dehydrogenase, putative
          Length = 348

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 103/215 (47%), Gaps = 22/215 (10%)

Query: 36  NVGFIGLGNMGSRMANNLIKAGYKVTVHDINHNVIKMFTDMGVPSKQTPFEVAEASDVVI 95
            VGF+G+G MG+ M  NLIKAG  VTV +   +       +G   + +P EVA ASDV  
Sbjct: 60  RVGFLGMGIMGTPMTQNLIKAGCDVTVWNRTKSKCDPLISLGAKYRPSPEEVAAASDVTF 119

Query: 96  TMLPSTSHVLDVYTGPNGLLYGGNIVRPRLLINSSTIDPETSR----KLSATVSNFVLTE 151
            ML      ++V  G NG    G +   +  ++ ST+D  TS+     + AT ++F    
Sbjct: 120 AMLADPESAVEVACGKNG--AAGGMGPGKGYVDVSTVDGGTSKLIGGHIKATGASF---- 173

Query: 152 KKDQWEKPVMLDAPVSGGVLAAEAGTLTFMVGGCEEAYLAAKSLFLSMGKNSIYCGGAGT 211
                     L+APVSG    AE G L F+  G +  Y         MGK+  Y G  G 
Sbjct: 174 ----------LEAPVSGSKKPAEDGQLIFLTAGDKPLYEIVAPFLDIMGKSRFYLGDVGN 223

Query: 212 GSAAKICNNLAMAVSMIGVSEALALGQSLGIRADP 246
           G+A K+  N+ M   M   SE + LG+ +G+  DP
Sbjct: 224 GAAMKLVVNMIMGSMMATFSEGILLGEKVGL--DP 256


>30071.m000444 3-hydroxyisobutyrate dehydrogenase, putative
          Length = 308

 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 26/222 (11%)

Query: 27  TSPPFSQFENVGFIGLGNMGSRMANNLIKAGYKVTVHDINHNVIKMFTDMGVPSKQTPFE 86
           TSP  ++   +G+IG+G MG+ MA+ L+ AGY +T++    +        G     +P E
Sbjct: 9   TSPTKTR---IGWIGIGVMGAAMASRLLSAGYSLTIYSRTPSKALKLQSKGAILASSPLE 65

Query: 87  VAEASDVVITMLPSTSHVLDVYTGP------NGLLYGGNIVRPRLLINSSTIDPETSRKL 140
           VA+ SD+V TM+   S V  +          +GL +GG      ++I+ ++  P  +R++
Sbjct: 66  VAKNSDIVCTMVGHPSDVRSIVLENQGKSILDGLHHGG------VIIDFTSSHPALAREI 119

Query: 141 SATVSNFVLTEKKDQWEKPVMLDAPVSGGVLAAEAGTLTFMVGGCEEAYLAAKSLFLSMG 200
                 F    +K  W     +D+PVSGG + A  G L    GG E        +F  +G
Sbjct: 120 ------FASAREKGCWA----VDSPVSGGDIGARDGKLAIFGGGDEIVINWLLPIFEVLG 169

Query: 201 KNSIYCGGAGTGSAAKICNNLAMAVSMIGVSEALALGQSLGI 242
           K + Y G  G G + KI N + +  +++G+SE L   + +G+
Sbjct: 170 KVT-YMGPPGRGQSCKIANQIVVGANLLGLSEGLVFAEKVGL 210


>29912.m005435 3-hydroxyisobutyrate dehydrogenase, putative
          Length = 290

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 21/154 (13%)

Query: 36  NVGFIGLGNMGSRMANNLIKAGYKVTVHDINHNVIKMFTDMGVPSKQTPFEVAEASDVVI 95
            VG+IG G MG  M ++LIKAGY +T+ +   +  +   DMG     +P  VA ASDVV 
Sbjct: 48  RVGWIGTGVMGRSMCSHLIKAGYTLTIFNRTLSKAQPLVDMGANLADSPLSVASASDVVF 107

Query: 96  TM--LPS-TSHV-LDVYTGP-NGLLYGGNIVRPRLLINSSTIDPETSRKLSATVSNFVLT 150
           ++   PS   HV LD  TG   GL  GG      +LI+ +T DP  + ++SA  S     
Sbjct: 108 SIVGFPSDVRHVLLDSTTGALQGLRPGG------VLIDMTTSDPSLAAEISAAASA---- 157

Query: 151 EKKDQWEKPVMLDAPVSGGVLAAEAGTLTFMVGG 184
                 +    +DAPVSGG   A+ GTL    GG
Sbjct: 158 ------KNCHSIDAPVSGGDRGAKNGTLAIFAGG 185


>60395.m000025 3-hydroxyisobutyrate dehydrogenase, putative
          Length = 202

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 16/192 (8%)

Query: 45  MGSRMANNLIKAGYKVTVHDINHNVIKMFTDMGVPSKQTPFEVAEASDVVITMLPSTSHV 104
           MG  MA  L+ AG+ VT  +  H   +  +  G  +     E    + +VI+ML +   V
Sbjct: 1   MGDPMARRLLAAGHAVTAWNRTHAKAEALSGAGARTVPALREAVHGAQIVISMLEAGPIV 60

Query: 105 LDVYTGPNGLLYGGNIVRPRLLINSSTIDPETSRKLSATVSNFVLTEKKDQWEKPVMLDA 164
             V               P L  N+  ID  ++++  A   +  LT +  ++     +DA
Sbjct: 61  QQVL----------QAALPALPANALWIDMSSTQQAEAQAFHAQLTAQGQRF-----IDA 105

Query: 165 PVSGGVLAAEAGTLTFMVGGCEEAYLAAKSLFLSMGKNSIYCGGAGTGSAAKICNNLAMA 224
           PVSGGV  A AGTL  M GG  + +  A+ +  +MG+ ++  G AG G  AK+CN L + 
Sbjct: 106 PVSGGVGGAAAGTLAIMAGGSADDFADAEPVLSAMGRPTL-VGPAGAGQVAKLCNQLIVG 164

Query: 225 VSMIGVSEALAL 236
            ++  V+EA+ L
Sbjct: 165 ATINIVAEAMLL 176