Jatropha Genome Database

JcCA0132271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0132271.10 + phase: 0 /partial
         (516 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005291 phenylalanine ammonia-lyase, putative                   858   0.0  
30078.m002319 Phenylalanine ammonia-lyase, putative                   695   0.0  
28507.m000156 Phenylalanine ammonia-lyase, putative                   686   0.0  
29638.m000502 Phenylalanine ammonia-lyase, putative                   670   0.0  
29912.m005293 ammonia ligase, putative                                490   e-139
29912.m005292 conserved hypothetical protein                          385   e-107

>29912.m005291 phenylalanine ammonia-lyase, putative
          Length = 688

 Score =  858 bits (2217), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/499 (83%), Positives = 441/499 (88%), Gaps = 15/499 (3%)

Query: 18  HWQKAAESLQSSHFDEVYEMASQFANAQTVDIQGTSLTVAEVTAVARRSNVSVQLNETVA 77
           HW+KAAESLQSSHFDEV +M SQFANA+ VDIQGT+LTVA+VTA++RR+ V V+L+E  A
Sbjct: 19  HWKKAAESLQSSHFDEVCQMVSQFANAKAVDIQGTTLTVAQVTAISRRTEVKVRLDEAAA 78

Query: 78  GDRVRQSADWVSFNISHGIDIYGVTTGFGATSHRRTTKTADLQTELIRFLNAGVIGKENL 137
            DRV +SA+WV+ NIS G D YGVTTGFGATSHRRT KTADLQTELIRFLNAGVIGKENL
Sbjct: 79  RDRVAKSAEWVADNISRGTDTYGVTTGFGATSHRRTNKTADLQTELIRFLNAGVIGKENL 138

Query: 138 PLSYSKAAMLVRTNTLMQGYSGIRWEILESISKLMNLNLIPKLPLRGTITASGDLVPLSY 197
           P SYSKAAMLVR NTLMQGYSGIRW+IL+SISKLMN NLIP+LPLRGTITASGDLVPL  
Sbjct: 139 PTSYSKAAMLVRANTLMQGYSGIRWDILDSISKLMNENLIPRLPLRGTITASGDLVPL-- 196

Query: 198 IAGLLTGRHNSKVVTVQGEEITGLEALKRAGIEAPFELQAKEGLALXXXXXXXXXXXXXX 257
               L GR             T  EAL RAGI APFELQAKEGLAL              
Sbjct: 197 -WSHLKGRD------------TATEALNRAGIPAPFELQAKEGLALVNGTAVGSAVAATV 243

Query: 258 CFDANILAFLAEILSALFCEVMHGKPEYTDPLTHQLKHHPGQIEAAAIMKHLLDESDYMK 317
           CFDANILA LAEILSALFCEVMHGKPEYTDPLTH+LKHHPGQIEAAAIMKHLLDESDYMK
Sbjct: 244 CFDANILALLAEILSALFCEVMHGKPEYTDPLTHELKHHPGQIEAAAIMKHLLDESDYMK 303

Query: 318 EAKIRNEKDPLTKPKQDRYAVRTSPQWLGPQIEVIRAATHSIEREINSVNDNPIIDVSRD 377
           EAKIR+EKDPLTKPKQDRYA+RTSPQWLGPQIEVIRAATHSIEREINSVNDNP+IDV+RD
Sbjct: 304 EAKIRHEKDPLTKPKQDRYAIRTSPQWLGPQIEVIRAATHSIEREINSVNDNPLIDVARD 363

Query: 378 LALHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCDYYNNGLPSNLSGGPNPSLD 437
           LALHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCDYYNNGLPSNLSGGPNPSLD
Sbjct: 364 LALHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCDYYNNGLPSNLSGGPNPSLD 423

Query: 438 YGLKGAEIAMASYCSELQFLANPVTSHVQSAEQHNQDVNSLGLISARKSAEAIEILKLMS 497
           YGLKGAEIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISARKSAEAIEIL LMS
Sbjct: 424 YGLKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKSAEAIEILTLMS 483

Query: 498 ATFMVALCQAIDLRHLEEN 516
           +TFMV LCQAIDLRHLEEN
Sbjct: 484 STFMVGLCQAIDLRHLEEN 502


>30078.m002319 Phenylalanine ammonia-lyase, putative
          Length = 714

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/505 (69%), Positives = 407/505 (80%), Gaps = 9/505 (1%)

Query: 19  WQKAAESLQSSHFDEVYEMASQFANAQTVDIQGTSLTVAEVTAVARRS-NVSVQLNETVA 77
           W  AAES++ SH DEV +M +++     V + G +LTVA+V A+A     V V+L+E+ A
Sbjct: 27  WGLAAESMKGSHLDEVKKMVAEY-RKPFVKLGGETLTVAQVAAIASHDCGVKVELSES-A 84

Query: 78  GDRVRQSADWVSFNISHGIDIYGVTTGFGATSHRRTTKTADLQTELIRFLNAGVIGK--- 134
              V+ S+DWV  +++ G D YGVTTGFGATSHRRT +   LQ ELIRFLNAG+ G    
Sbjct: 85  RAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTE 144

Query: 135 --ENLPLSYSKAAMLVRTNTLMQGYSGIRWEILESISKLMNLNLIPKLPLRGTITASGDL 192
               LP S ++AAMLVR NTL+QGYSGIR+EILE+I+KL+N N+ P LPLRGTITASGDL
Sbjct: 145 SCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDL 204

Query: 193 VPLSYIAGLLTGRHNSKVVTVQGEEITGLEALKRAGIEAPF-ELQAKEGLALXXXXXXXX 251
           VPLSYIAGLLTGR NSK +   GE +  LEA + AGIE+ F ELQ KEGLAL        
Sbjct: 205 VPLSYIAGLLTGRPNSKAIGPNGESMDALEAFRLAGIESGFFELQPKEGLALVNGTAVGS 264

Query: 252 XXXXXXCFDANILAFLAEILSALFCEVMHGKPEYTDPLTHQLKHHPGQIEAAAIMKHLLD 311
                  F+ANILA L+EILSA+F EVM+GKPE+TD LTH+LKHHPGQIEAAAIM+H+LD
Sbjct: 265 GLASMVLFEANILAVLSEILSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILD 324

Query: 312 ESDYMKEAKIRNEKDPLTKPKQDRYAVRTSPQWLGPQIEVIRAATHSIEREINSVNDNPI 371
            S Y+K AK  +E DPL KPKQDRYA+RTSPQWLGPQIEVIR +T SIEREINSVNDNP+
Sbjct: 325 GSSYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPL 384

Query: 372 IDVSRDLALHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCDYYNNGLPSNLSGG 431
           IDVSR+ ALHGGNFQGTPIGVSMDN R+AIA+IGKLMFAQFSELV D+YNNGLPSNL+ G
Sbjct: 385 IDVSRNKALHGGNFQGTPIGVSMDNARLAIASIGKLMFAQFSELVNDFYNNGLPSNLTAG 444

Query: 432 PNPSLDYGLKGAEIAMASYCSELQFLANPVTSHVQSAEQHNQDVNSLGLISARKSAEAIE 491
            NPSLDYG KGAEIAMASYCSELQ+LANPVTSHVQSAEQHNQDVNSLGLIS+RK+AEA++
Sbjct: 445 RNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAVD 504

Query: 492 ILKLMSATFMVALCQAIDLRHLEEN 516
           ILKLMS T++VALCQAIDLRHLEEN
Sbjct: 505 ILKLMSTTYLVALCQAIDLRHLEEN 529


>28507.m000156 Phenylalanine ammonia-lyase, putative
          Length = 719

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/506 (68%), Positives = 402/506 (79%), Gaps = 9/506 (1%)

Query: 18  HWQKAAESLQSSHFDEVYEMASQFANAQTVDIQGTSLTVAEVTAVARR-SNVSVQLNETV 76
           +W   A+SL+ SH DEV  M  ++     V + G +LT+A+VTA+A R + + V+L+E  
Sbjct: 31  NWGMLADSLKGSHLDEVKRMVDEYRRP-VVRLGGETLTIAQVTAIANRDAGIKVELSED- 88

Query: 77  AGDRVRQSADWVSFNISHGIDIYGVTTGFGATSHRRTTKTADLQTELIRFLNAGVIGK-- 134
           A   V+ S+DWV  +++ G D YGVTTGFGATSHRRT +   LQ ELIRFLNAG+ G   
Sbjct: 89  ARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQRELIRFLNAGIFGNGT 148

Query: 135 ---ENLPLSYSKAAMLVRTNTLMQGYSGIRWEILESISKLMNLNLIPKLPLRGTITASGD 191
                LP S ++AAMLVR NTL+QGYSGIR+EILE+I+K +N N+ P LPLRGTITASGD
Sbjct: 149 ESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFINHNVTPSLPLRGTITASGD 208

Query: 192 LVPLSYIAGLLTGRHNSKVVTVQGEEITGLEALKRAGIEAPF-ELQAKEGLALXXXXXXX 250
           LVPLSYIAGLL GR NSK V   GE +   EA   AGI + F +LQ KEGLAL       
Sbjct: 209 LVPLSYIAGLLIGRPNSKCVGPNGESLDPTEAFTLAGINSGFFDLQPKEGLALVNGTAVG 268

Query: 251 XXXXXXXCFDANILAFLAEILSALFCEVMHGKPEYTDPLTHQLKHHPGQIEAAAIMKHLL 310
                   F+AN+L  L+E+LSA+F EVM GKPE+TD LTH+LKHHPGQIEAAAIM+H+L
Sbjct: 269 SGLASMVLFEANVLGILSEVLSAVFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL 328

Query: 311 DESDYMKEAKIRNEKDPLTKPKQDRYAVRTSPQWLGPQIEVIRAATHSIEREINSVNDNP 370
           D S Y+K A+  +E DPL KPKQDRYA+RTSPQWLGPQIEVIR+AT  IEREINSVNDNP
Sbjct: 329 DGSSYIKAAQKLHEVDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREINSVNDNP 388

Query: 371 IIDVSRDLALHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCDYYNNGLPSNLSG 430
           +IDVSR+ ALHGGNFQGTPIGVSMDN R+AIAAIGKLMFAQFSELV D+YNNGLPSNL+G
Sbjct: 389 LIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLTG 448

Query: 431 GPNPSLDYGLKGAEIAMASYCSELQFLANPVTSHVQSAEQHNQDVNSLGLISARKSAEAI 490
           G NPSLDYG KGAEIAMASYCSELQFLANPVT+HVQSAEQHNQDVNSLGLISARK+AEA+
Sbjct: 449 GRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAV 508

Query: 491 EILKLMSATFMVALCQAIDLRHLEEN 516
           +ILKLMS+TF+VALCQAIDLRHLEEN
Sbjct: 509 DILKLMSSTFLVALCQAIDLRHLEEN 534


>29638.m000502 Phenylalanine ammonia-lyase, putative
          Length = 716

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/509 (66%), Positives = 406/509 (79%), Gaps = 13/509 (2%)

Query: 19  WQKAAESLQSSHFDEVYEMASQFANAQTVDIQGTSLTVAEVTAVARR-----SNVSVQLN 73
           W  AAE+L+ SH DEV +M  ++ N   V + G +LT+ +V AVA       + V+V+L 
Sbjct: 25  WGIAAEALKGSHLDEVKKMVREYRNP-VVRLGGETLTIGQVAAVAVGAGAAGNRVAVELC 83

Query: 74  ETVAGDRVRQSADWVSFNISHGIDIYGVTTGFGATSHRRTTKTADLQTELIRFLNAGVIG 133
           E+ A   V+ S+DWV  ++  G D YGVTTGFGATSHRRT + A LQ ELIRFLNAG++G
Sbjct: 84  ES-ARAGVKASSDWVMESMEKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGILG 142

Query: 134 KEN-----LPLSYSKAAMLVRTNTLMQGYSGIRWEILESISKLMNLNLIPKLPLRGTITA 188
                   LP S ++AAMLVR NTL+QGYSGIR+EILE+I+KL+N N+ P LPLRG+ITA
Sbjct: 143 HGTESSHILPQSATRAAMLVRINTLLQGYSGIRFEILEAITKLINHNITPCLPLRGSITA 202

Query: 189 SGDLVPLSYIAGLLTGRHNSKVVTVQGEEITGLEALKRAGIEAPF-ELQAKEGLALXXXX 247
           SGDL+P SYIAG LTGR NS  +   G  +   EA + AGI+A F ELQ KEGLAL    
Sbjct: 203 SGDLLPFSYIAGFLTGRPNSIALGPNGGSLDAGEAFRLAGIDAGFFELQPKEGLALVNGT 262

Query: 248 XXXXXXXXXXCFDANILAFLAEILSALFCEVMHGKPEYTDPLTHQLKHHPGQIEAAAIMK 307
                      F+ANILA L+E++SA+F EVM GKPE+TD LTH+LKHHPGQIEAAAIM+
Sbjct: 263 GVGAGLASIVLFEANILALLSEVVSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIME 322

Query: 308 HLLDESDYMKEAKIRNEKDPLTKPKQDRYAVRTSPQWLGPQIEVIRAATHSIEREINSVN 367
           H+LD S Y+K+AK  +E DPL KPKQDRYA+RTSPQWLGPQIEVIR++T SIEREINSVN
Sbjct: 323 HILDGSSYVKQAKKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVN 382

Query: 368 DNPIIDVSRDLALHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCDYYNNGLPSN 427
           DNP+IDVSR+ ALHGGNFQGTPIGVSMDN R+A+A+IGKLMFAQFSELV D+YNNGLPSN
Sbjct: 383 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSN 442

Query: 428 LSGGPNPSLDYGLKGAEIAMASYCSELQFLANPVTSHVQSAEQHNQDVNSLGLISARKSA 487
           L+GG NPSLDYG KGAEIAMA+YCSELQ+LANPVT+HVQSAEQHNQDVNSLGLIS+RK+A
Sbjct: 443 LTGGRNPSLDYGFKGAEIAMAAYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTA 502

Query: 488 EAIEILKLMSATFMVALCQAIDLRHLEEN 516
           EA++ILKLMS+TF+VALCQAIDLRHLEEN
Sbjct: 503 EAVDILKLMSSTFLVALCQAIDLRHLEEN 531


>29912.m005293 ammonia ligase, putative
          Length = 309

 Score =  490 bits (1261), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 228/238 (95%), Positives = 236/238 (99%)

Query: 279 MHGKPEYTDPLTHQLKHHPGQIEAAAIMKHLLDESDYMKEAKIRNEKDPLTKPKQDRYAV 338
           MHGKPEYTDPLTH+LKHHPGQIEAAAIMKHLLDESDYMKEAKIR+EKDPLTKPKQDRYA+
Sbjct: 1   MHGKPEYTDPLTHELKHHPGQIEAAAIMKHLLDESDYMKEAKIRHEKDPLTKPKQDRYAI 60

Query: 339 RTSPQWLGPQIEVIRAATHSIEREINSVNDNPIIDVSRDLALHGGNFQGTPIGVSMDNLR 398
           RTSPQWLGPQIEVIRAATHSIEREINSVNDNP+IDV+RDLALHGGNFQGTPIGVSMDNLR
Sbjct: 61  RTSPQWLGPQIEVIRAATHSIEREINSVNDNPLIDVARDLALHGGNFQGTPIGVSMDNLR 120

Query: 399 IAIAAIGKLMFAQFSELVCDYYNNGLPSNLSGGPNPSLDYGLKGAEIAMASYCSELQFLA 458
           IAIAAIGKLMFAQFSELVCDYYNNGLPSNLSGGPNPSLDYGLKGAEIAMASYCSELQ+LA
Sbjct: 121 IAIAAIGKLMFAQFSELVCDYYNNGLPSNLSGGPNPSLDYGLKGAEIAMASYCSELQYLA 180

Query: 459 NPVTSHVQSAEQHNQDVNSLGLISARKSAEAIEILKLMSATFMVALCQAIDLRHLEEN 516
           NPVT+HVQSAEQHNQDVNSLGLISARKSAEAIEIL LMS+TFMV LCQAIDLRHLEEN
Sbjct: 181 NPVTTHVQSAEQHNQDVNSLGLISARKSAEAIEILTLMSSTFMVGLCQAIDLRHLEEN 238


>29912.m005292 conserved hypothetical protein
          Length = 253

 Score =  385 bits (988), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/226 (82%), Positives = 204/226 (90%)

Query: 18  HWQKAAESLQSSHFDEVYEMASQFANAQTVDIQGTSLTVAEVTAVARRSNVSVQLNETVA 77
           HW+KAAESLQSSHFDEV +M SQFA+A+ VDIQGT+LTVA+VTA++RR+ V V+L+E  A
Sbjct: 19  HWKKAAESLQSSHFDEVCQMVSQFADAKAVDIQGTTLTVAQVTAISRRAEVKVRLDEAAA 78

Query: 78  GDRVRQSADWVSFNISHGIDIYGVTTGFGATSHRRTTKTADLQTELIRFLNAGVIGKENL 137
            DRV +SA+WV+ NIS G D YGVTTGFGATSHRRT KTADLQTELIRFLNAGVIGKENL
Sbjct: 79  RDRVAKSAEWVADNISRGTDTYGVTTGFGATSHRRTNKTADLQTELIRFLNAGVIGKENL 138

Query: 138 PLSYSKAAMLVRTNTLMQGYSGIRWEILESISKLMNLNLIPKLPLRGTITASGDLVPLSY 197
           P SYSKAAMLVR NTLMQGYSGIRW+IL+SISKLMN NLIP+LPLRGTITASGDLVPLSY
Sbjct: 139 PTSYSKAAMLVRANTLMQGYSGIRWDILDSISKLMNENLIPRLPLRGTITASGDLVPLSY 198

Query: 198 IAGLLTGRHNSKVVTVQGEEITGLEALKRAGIEAPFELQAKEGLAL 243
           IAGLLTGRHNSKVVT +GEEIT  EAL RAGI APFELQAKEGLAL
Sbjct: 199 IAGLLTGRHNSKVVTPEGEEITATEALNRAGIPAPFELQAKEGLAL 244