Jatropha Genome Database

JcCA0132071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0132071.10 + phase: 0 
         (379 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29866.m000609 starch synthase, putative                               603   e-173
30068.m002598 starch synthase, putative                               398   e-111
28838.m000254 starch synthase, putative                               230   7e-61
29693.m002052 starch synthase, putative                               102   2e-22
29842.m003588 starch synthase, putative                                89   4e-18
28179.m000474 starch synthase, putative                                63   2e-10

>29866.m000609 starch synthase, putative
          Length = 624

 Score =  603 bits (1556), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 277/323 (85%), Positives = 308/323 (95%), Gaps = 1/323 (0%)

Query: 6   ANGHRVMTISPRYDQYKDSWDTNVVIQIEVGGKLETVRFFHC-YKRGVDRVFVDHPMFLE 64
           ANGHRVMTISPRYDQYKD+WDTN V+Q++VG ++ETVR+FHC YKRGVDRVFVDHPMFLE
Sbjct: 111 ANGHRVMTISPRYDQYKDAWDTNFVVQVKVGDRIETVRYFHCCYKRGVDRVFVDHPMFLE 170

Query: 65  KVWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVVFIA 124
           K+WGKTGSKLYGPQAG DYE+NQLRFSLFCQAAIEAPRLLSLN+ KYFSGPYGEDV+FIA
Sbjct: 171 KIWGKTGSKLYGPQAGDDYEDNQLRFSLFCQAAIEAPRLLSLNTSKYFSGPYGEDVIFIA 230

Query: 125 NDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNSFDF 184
           NDWHTAL+PCYLK+ YK++G+Y+NAKV FCIHNIAYQGRFA +DF+LLNLP++FK SFDF
Sbjct: 231 NDWHTALVPCYLKSIYKARGIYKNAKVAFCIHNIAYQGRFAIADFSLLNLPDQFKRSFDF 290

Query: 185 FDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVELDNILRMTGISGIV 244
            DGY+KPVKGRKINWMKAGI ESDR+VTVSP+YAEELVSG+EKGVEL+NILRMTGI GIV
Sbjct: 291 IDGYDKPVKGRKINWMKAGISESDRVVTVSPYYAEELVSGVEKGVELENILRMTGIIGIV 350

Query: 245 NGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGLPIDRNIPVIGFIGRLEEQ 304
           NGMDVQEWNPSTDKYINVK+D+ TV +AKPLLKEALQAEVGLP+DRNIPVIGFIGRLEEQ
Sbjct: 351 NGMDVQEWNPSTDKYINVKFDATTVTDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQ 410

Query: 305 KGSDILAAAIPFLIQENVQIIIL 327
           KGSDILAAAIP+ IQENVQIIIL
Sbjct: 411 KGSDILAAAIPYFIQENVQIIIL 433


>30068.m002598 starch synthase, putative
          Length = 526

 Score =  398 bits (1023), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/322 (60%), Positives = 232/322 (72%), Gaps = 55/322 (17%)

Query: 6   ANGHRVMTISPRYDQYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDRVFVDHPMFLEK 65
           A GHRVMT+SPRYDQYKD+WDT V+++I VG ++ET+RFFHCYKRGVDRVFVDHPMFLEK
Sbjct: 110 ARGHRVMTVSPRYDQYKDAWDTCVLVEITVGDRVETIRFFHCYKRGVDRVFVDHPMFLEK 169

Query: 66  VWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVVFIAN 125
           VWGKTGSK+YGP AG DY++NQLRFSL C  A                            
Sbjct: 170 VWGKTGSKIYGPTAGLDYKDNQLRFSLLCLVAF--------------------------- 202

Query: 126 DWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNSFDFF 185
                   C     Y+ +  + +    F + N+  Q                FK+SFDF 
Sbjct: 203 --------CIHNIAYQGRFAFSD----FSLLNLPDQ----------------FKSSFDFI 234

Query: 186 DGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVELDNILRMTGISGIVN 245
           DGY+KPV GRKINWMKAG+LESDR++TVSP+YAEE++SG+E+GVELDNI+R TGISGI+N
Sbjct: 235 DGYDKPVNGRKINWMKAGVLESDRVLTVSPYYAEEVISGVERGVELDNIIRKTGISGIIN 294

Query: 246 GMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGLPIDRNIPVIGFIGRLEEQK 305
           GMDVQEWNP+TDKYI + YD+ TV EAKPLLKEALQAEVGLP+DRNIP+IGFIGRLEEQK
Sbjct: 295 GMDVQEWNPATDKYIGINYDATTVTEAKPLLKEALQAEVGLPVDRNIPLIGFIGRLEEQK 354

Query: 306 GSDILAAAIPFLIQENVQIIIL 327
           GSDIL AAI  L + NVQI+IL
Sbjct: 355 GSDILVAAISQLAKYNVQIVIL 376


>28838.m000254 starch synthase, putative
          Length = 754

 Score =  230 bits (587), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 190/330 (57%), Gaps = 32/330 (9%)

Query: 8   GHRVMTISPRYDQYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDRVFVDHPMFLEKVW 67
           GHRVM ++PRY  Y ++ D  V  + +V G+   V +F  +  GVD VF++ PMF     
Sbjct: 296 GHRVMVVAPRYGNYAETQDIGVRKRYKVDGQDFEVTYFQAFIDGVDFVFIECPMFRH--- 352

Query: 68  GKTGSKLYGPQAGTDYENNQL----RFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVVFI 123
               S +YG         N++    R  LFC+AAIE P  +      Y  G    ++VFI
Sbjct: 353 --IESNIYG--------GNRVDILKRMVLFCKAAIEVPWHVPCGGICYGDG----NLVFI 398

Query: 124 ANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNSFD 183
           ANDWHTALLP YL+A+Y+  G+ +  + V  IHNIA+QGR    DF   +LPE + + F 
Sbjct: 399 ANDWHTALLPVYLRAYYRDNGLMQFTRSVLVIHNIAHQGRGPMDDFVYTDLPEHYIDLFK 458

Query: 184 FFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVELDNILRMTG--IS 241
            +D    PV G   N   AG+  +DR+VTVS  YA EL +  E G  L NI+       S
Sbjct: 459 LYD----PVGGDHFNIFAAGLKTADRVVTVSHGYAWELKTS-EGGWGLHNIINENDWKFS 513

Query: 242 GIVNGMDVQEWNPSTDKYIN----VKYDSATVMEAKPLLKEALQAEVGLPIDRNIPVIGF 297
           GIVNG+D +EWNP  D ++       Y   T+   K   K ALQ E+GLP+  ++P+IGF
Sbjct: 514 GIVNGIDTKEWNPLCDVHLTSDGYTHYSLETLDTGKSQCKAALQKELGLPVRPDVPLIGF 573

Query: 298 IGRLEEQKGSDILAAAIPFLIQENVQIIIL 327
           IGRL+ QKG D++A AIP+++ ++VQ+++L
Sbjct: 574 IGRLDHQKGVDLIAEAIPWMMGQDVQLVML 603


>29693.m002052 starch synthase, putative
          Length = 998

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 162/341 (47%), Gaps = 48/341 (14%)

Query: 4   VQANGHRVMTISPRYD--QYKDSWDT---NVVIQIEVGGKLETVRFFHCYKRGVDRVFVD 58
           +Q  GH V  I P+YD  QY    +    +V ++    GKL   + +     G+   F++
Sbjct: 529 LQKRGHLVEIILPKYDCMQYNGIGNLRALDVTVESYFDGKLYKNKIWVGTIEGLPVYFIE 588

Query: 59  HPMFLEKVWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSGPYGE 118
            P   +K + +   + YG     D++    RFS F +AA+E    L   SGK        
Sbjct: 589 -PHHPDKFFWR--GQFYGEH--DDFK----RFSFFSRAALE----LLHQSGK------KP 629

Query: 119 DVVFIANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFAL------- 171
           D++  ++DW TA +       Y  KG+  +A++ F  HN  YQG    S+ A        
Sbjct: 630 DIIH-SHDWQTAFVAPLYWDLYAPKGL-NSARICFTCHNFEYQGTAPASELASCGLDVHH 687

Query: 172 LNLPERFKNSFDFFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVEL 231
           LN P+R +++          +   +IN +K  ++ S+ + TVSP YA+E V   E G  L
Sbjct: 688 LNRPDRMQDN----------LAHDRINPVKGAVVFSNIVTTVSPTYAQE-VRTAEGGRGL 736

Query: 232 DNILRMTGIS--GIVNGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGLPI- 288
            + L        GI+NG+D   WNP+TD  + V+Y SA  ++AK   K A +  +GL   
Sbjct: 737 HSTLNFHAKKFIGILNGIDTDSWNPATDTCLKVQY-SANDLQAKAENKLATRRLLGLSTA 795

Query: 289 DRNIPVIGFIGRLEEQKGSDILAAAIPFLIQENVQIIILVS 329
           D   P++G I RL  QKG  ++  AI   ++   Q I+L S
Sbjct: 796 DARQPLVGCITRLVPQKGVHLIRHAIYRTVELGGQFILLGS 836


>29842.m003588 starch synthase, putative
          Length = 1095

 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 108/245 (44%), Gaps = 54/245 (22%)

Query: 85  NNQLRFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVVFIANDWHTALLPCYLKAFYKSKG 144
           N+  RF  FC AA+E        SG      +  D++   +DW +A +    K  Y   G
Sbjct: 746 NDGERFGFFCHAALE----FLQQSG------FHPDIIH-CHDWSSAPVAWLFKDHYMHYG 794

Query: 145 MYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNSFDFFDGYEKPVKGRKINWMKAGI 204
           + + A+VVF IHN+         +F   N+                   GR + +     
Sbjct: 795 LSK-ARVVFTIHNL---------EFGANNI-------------------GRAMAY----- 820

Query: 205 LESDRIVTVSPHYAEELVSGIEKGVELDNILRMTGISGIVNGMDVQEWNPSTDKYINVKY 264
             SD   TVSP Y+ E+         L          GI+NG+D   W+P  DK+I V Y
Sbjct: 821 --SDMATTVSPTYSREVAGNSAIAPHLHKF------HGILNGIDPDIWDPYNDKFIPVTY 872

Query: 265 DSATVMEAKPLLKEALQAEVGLPIDRNIPVIGFIGRLEEQKGSDILAAAIPFLIQENVQI 324
            S  V+E K   KEALQ  +GL    ++P+IG I RL  QKG  ++  AI   +  N Q+
Sbjct: 873 TSENVVEGKRAAKEALQQRLGLK-KADLPLIGIITRLTHQKGIHLIKHAIWRTLDRNGQV 931

Query: 325 IILVS 329
           ++L S
Sbjct: 932 VLLGS 936


>28179.m000474 starch synthase, putative
          Length = 720

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 142/336 (42%), Gaps = 35/336 (10%)

Query: 2   LLVQANGHRVMTISPRYDQYKDSWDTNVV-IQIE----VGGKLETVRFFHCYKRGVDRVF 56
           L +Q  GH V  I P+Y     S    +  IQ E      G+L   + +     G+   F
Sbjct: 234 LALQKKGHLVEVILPKYASLNLSEIHGLQEIQAESYSYFNGQLHGNKIWTGVVNGIGVTF 293

Query: 57  VDHPMFLEKVWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSGPY 116
           +  P++    + +   K+YG      Y ++  RFS F +A+++        SGK      
Sbjct: 294 IQ-PLYYSSFFNR--EKIYG------YTDDFERFSYFSRASLD----FLTKSGK------ 334

Query: 117 GEDVVFIANDWHTALL-PCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNL- 174
             DV+ I N W TA++ P +   F K +G+    +++   H++  Q        AL  L 
Sbjct: 335 QPDVLHIHN-WETAIVGPLFWDVFAK-QGL-EGTRILLTCHSLDSQCLEKPDMLALCGLD 391

Query: 175 PERFKNSFDFFDGYEKPVKGRKINWMKAGILESDRIVTVSP-HYAEELVSGIEKGVELDN 233
           P R        D      K + +N +K GI+ S+++V VS  H     +  +  G+    
Sbjct: 392 PGRLHRPNRLQDN----AKTQFVNILKGGIVYSNKVVIVSSIHSKSRFIQDLSHGLGPTL 447

Query: 234 ILRMTGISGIVNGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGLPIDRNIP 293
            +    +     G D   W+PS D+++   Y S   M+ K + + ALQ  VGL  + ++ 
Sbjct: 448 SIHQDKLLVTPYGFDKSTWDPSKDRFLPENY-SKDDMKGKTVCRVALQQYVGLSNNTSVV 506

Query: 294 VIGFIGRLEEQKGSDILAAAIPFLIQENVQIIILVS 329
           ++G I         D L A +    + NVQ I + S
Sbjct: 507 LVGCILSELSDFNVDSLKAVVWNATRNNVQFIFMGS 542