Jatropha Genome Database

JcCA0132021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0132021.10 + phase: 0 /partial
         (138 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30026.m001501 mads box protein, putative                              243   1e-65
30170.m013818 mads box protein, putative                              116   4e-27
29596.m000699 mads box protein, putative                               66   5e-12
28333.m000571 mads box protein, putative                               61   1e-10
29790.m000814 mads box protein, putative                               59   9e-10
29929.m004629 mads box protein, putative                               57   3e-09
29804.m001536 mads box protein, putative                               57   4e-09
30174.m009079 mads box protein, putative                               56   4e-09
30138.m003941 mads box protein, putative                               55   8e-09
30174.m009080 mads box protein, putative                               54   3e-08
30138.m003939 mads box protein, putative                               52   9e-08
30147.m014137 mads box protein, putative                               51   1e-07
30174.m008934 mads box protein, putative                               51   2e-07
29790.m000813 mads box protein, putative                               50   4e-07
30174.m008936 mads box protein, putative                               49   6e-07
30147.m014133 mads box protein, putative                               47   4e-06
29907.m000663 mads box protein, putative                               46   5e-06

>30026.m001501 mads box protein, putative
          Length = 177

 Score =  243 bits (621), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 122/138 (88%), Positives = 127/138 (92%), Gaps = 1/138 (0%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           FYQQ+AAKLR QI  LQ S R+MLGESLG +N KDL+GLE RLEKGISRIRSKKNELLFA
Sbjct: 41  FYQQEAAKLRVQIGNLQNSNRHMLGESLGALNLKDLKGLEGRLEKGISRIRSKKNELLFA 100

Query: 61  EIEYMQKREIDLHNNNQLLRAKIAENERKQQNMNLMPGGGNYEIIQSQPFDNRNYFQVNA 120
           EIEYMQKREIDLHNNNQLLRAKIAENERK QNMNLMPGGGNYEI+QSQPFDNRNYFQVNA
Sbjct: 101 EIEYMQKREIDLHNNNQLLRAKIAENERK-QNMNLMPGGGNYEIMQSQPFDNRNYFQVNA 159

Query: 121 LQPTNHYPQQDQMALQLV 138
           LQ TNHYP QDQMALQLV
Sbjct: 160 LQSTNHYPHQDQMALQLV 177


>30170.m013818 mads box protein, putative
          Length = 287

 Score =  116 bits (290), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/138 (48%), Positives = 93/138 (67%), Gaps = 5/138 (3%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           +YQQ++AKLR QI  LQ S R+++G+SL  +  K+L+ LE+RLE+GI+RIRSKK+ELL A
Sbjct: 134 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHELLLA 193

Query: 61  EIEYMQKREIDLHNNNQLLRAKIAENERKQQNMNLMPGGGNYEIIQSQPFDNRNYFQVNA 120
           EIEY+QKREI+L N +  LR KIAE ER QQ  N++ G    E+   Q   +RN+F  + 
Sbjct: 194 EIEYLQKREIELENESVCLRTKIAEIERLQQ-ANMVTGA---ELNAIQALTSRNFFGSHM 249

Query: 121 LQPTNHYPQ-QDQMALQL 137
           ++    Y    D+  L L
Sbjct: 250 IEGGAAYSHPSDKKILHL 267


>29596.m000699 mads box protein, putative
          Length = 262

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (8%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           F+Q++AA LR Q+  LQ++ R M+GE L G++ K+L+ LE RLE  +  +R KK++LL  
Sbjct: 88  FWQREAAMLRQQLQNLQENHRQMMGEELSGLSIKELQNLEGRLEMSLRGVRMKKDQLLMD 147

Query: 61  EIEYMQKREIDLHNNNQLLRAKIAENERKQQNMNL---MPGGGNYEIIQSQPFDNRNYFQ 117
           EIE + ++   +H  N  L  K+  N  +Q+N  L   + G GN          NR+Y  
Sbjct: 148 EIEELNRKGNLIHQENVELYKKV--NLIRQENTELYKKVYGTGNTNAA------NRDYLS 199

Query: 118 VNAL 121
            N L
Sbjct: 200 TNGL 203


>28333.m000571 mads box protein, putative
          Length = 173

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 2/95 (2%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           F+Q++AA LR Q+  LQ+S R  +GE L G++ KDL+ LE++LE  +  IR+KK ++L  
Sbjct: 27  FWQREAAVLRQQLHNLQESHRQFMGEQLYGLSVKDLQSLENQLEMSLRGIRTKKEQILTD 86

Query: 61  EIEYMQKREIDLHNNNQLLRAKIAENERKQQNMNL 95
           EI+ + ++   +H  N  L  K+  N   Q+N+ L
Sbjct: 87  EIQELSRKGNLIHQENVELYKKV--NTIHQENIEL 119


>29790.m000814 mads box protein, putative
          Length = 188

 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 52/81 (64%)

Query: 8   KLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIEYMQK 67
           KL  +I  L++S+RN  G+ LG ++ ++L+ LE +++  + R+RS+KN+L    +  +QK
Sbjct: 35  KLVARIEILERSLRNFAGKDLGPMSLRELQHLEQQIDTALKRVRSRKNQLYHESLAALQK 94

Query: 68  REIDLHNNNQLLRAKIAENER 88
            E  LH  N +L  ++ ENE+
Sbjct: 95  NERSLHEQNNMLAKQLKENEK 115


>29929.m004629 mads box protein, putative
          Length = 182

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 53/83 (63%)

Query: 3   QQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEI 62
           QQ+  KL+ +   LQ+S RN+LGE LG ++ KDL  LE +L+  + +IRS + + +  ++
Sbjct: 34  QQEYLKLKARYEALQRSQRNLLGEDLGPLSSKDLESLERQLDMSLKQIRSTRTQYMLDQL 93

Query: 63  EYMQKREIDLHNNNQLLRAKIAE 85
             +Q++E  L+  N+ L+ ++ E
Sbjct: 94  TDLQRKEHMLNEANKTLKQRLVE 116


>29804.m001536 mads box protein, putative
          Length = 266

 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 48/68 (70%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           F+Q++AA LR ++  LQ+S R ++GE L G++ KDL+ LE++LE  +  +R KK+++L  
Sbjct: 115 FWQREAASLRKELQYLQESHRQLMGEELSGLSAKDLQNLENQLEMSLKGVRMKKDQILTD 174

Query: 61  EIEYMQKR 68
           EI  + ++
Sbjct: 175 EIRELNRK 182


>30174.m009079 mads box protein, putative
          Length = 180

 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 51/81 (62%)

Query: 8   KLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIEYMQK 67
           +L+ ++  LQ++ R+ LGE L  +  K+L+ LE +L+  +  IR++KN+L+F  I  +QK
Sbjct: 35  RLKAKVELLQRNHRHYLGEDLDSLTLKELQNLEQQLDTALKHIRTRKNQLMFESISELQK 94

Query: 68  REIDLHNNNQLLRAKIAENER 88
           +E  +   N +L  +I E E+
Sbjct: 95  KEKAIQEQNNMLSKQIKEKEK 115


>30138.m003941 mads box protein, putative
          Length = 166

 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 51/83 (61%)

Query: 4  QQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIE 63
          Q+  KL+ ++  LQ+S RN+LGE L  ++ K+L  LE +LE  +  IRS K + +  ++ 
Sbjct: 14 QEYLKLKARVEVLQRSQRNLLGEDLAPLDTKELEQLEHQLETSLKHIRSTKTQFILDQLT 73

Query: 64 YMQKREIDLHNNNQLLRAKIAEN 86
           +Q RE  L + N+ LR K+ E+
Sbjct: 74 DLQNREQLLLDANKALRRKLEES 96


>30174.m009080 mads box protein, putative
          Length = 198

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 47/83 (56%)

Query: 4   QQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIE 63
           Q+  KL+ ++  LQ+S R+ LGE LG +  KDL  LE +L+  +  +R  K+  +  ++ 
Sbjct: 51  QEYLKLKSRVEALQRSQRHFLGEDLGNLGTKDLEQLEHQLDSSLKHVRLTKSNFMLDQLS 110

Query: 64  YMQKREIDLHNNNQLLRAKIAEN 86
            +Q++E  L   N  LR K+ E 
Sbjct: 111 QLQRKEEMLLQTNNALRKKLEET 133


>30138.m003939 mads box protein, putative
          Length = 244

 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)

Query: 2   YQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAE 61
           +  + AKL+ ++  LQ++ R+ +GE L  +  KDL+ LE +++  +  +RS+KN+L++  
Sbjct: 91  WTLEHAKLKARVEVLQRNQRHFMGEELDTLTLKDLQNLEQQIDSALKHVRSRKNQLMYES 150

Query: 62  IEYMQKREIDLHN-NNQL 78
           I  +QK++  L   NNQL
Sbjct: 151 ISELQKKDKALQEQNNQL 168


>30147.m014137 mads box protein, putative
          Length = 154

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 52/83 (62%)

Query: 5  QAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIEY 64
          +  +L+ +   LQ    ++LGE LG ++ K+L+ +E +L++ +S+ R +K +LL   +E 
Sbjct: 10 EVTRLKTKYESLQCCQSHLLGEELGPLSVKELQKIEKQLDRTLSQARQRKTQLLVERMEE 69

Query: 65 MQKREIDLHNNNQLLRAKIAENE 87
          ++K+E DL   N+ L+ K+ E +
Sbjct: 70 LRKKEHDLGEENKQLKIKLEEGQ 92


>30174.m008934 mads box protein, putative
          Length = 244

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 54/82 (65%)

Query: 2   YQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAE 61
           + Q+  KL+ +   LQ++ R++LGE LG ++ K+L+ LE +LE  ++  R +K +++  +
Sbjct: 88  WYQEVTKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQ 147

Query: 62  IEYMQKREIDLHNNNQLLRAKI 83
           +E ++K+E  L + N+ L+ K+
Sbjct: 148 MEDLRKKERHLGDLNKQLKFKL 169


>29790.m000813 mads box protein, putative
          Length = 180

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query: 8   KLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIEYMQK 67
           KL+ +   LQK+ RN+LGE LG ++ K+L  LE +LE  +  +RS + + +  ++  +Q 
Sbjct: 34  KLKTRFESLQKTQRNLLGEDLGPLSTKELEQLERQLESSLKLVRSTRTQFMLDQLSDLQN 93

Query: 68  REIDLHNNNQLLRAKIAE 85
           +E  L   N+ L  K+ E
Sbjct: 94  KEQLLLEANRALTLKLDE 111


>30174.m008936 mads box protein, putative
          Length = 157

 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%)

Query: 5   QAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIEY 64
           +A  L  +I  L+ S R +LG+ LG  N ++L+ +E +LEK +S IR++KN++   +IE 
Sbjct: 33  EAGNLMKKIELLEVSKRKLLGQGLGSCNLEELQQIEQQLEKSVSSIRARKNQVFKEQIEQ 92

Query: 65  MQKREIDLHNNNQLLRAKIA 84
           ++++E  L   N  L  K  
Sbjct: 93  LKEKEKQLAAENARLSEKCG 112


>30147.m014133 mads box protein, putative
          Length = 213

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 51/83 (61%)

Query: 4   QQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIE 63
           +++A L  +I  L+ S R +LG+ L   + ++L+ + S+LE+ +S IRS+K +L   ++E
Sbjct: 93  EESAALVKKIEELEISQRKLLGQGLSSCSIEELQEIHSQLERSLSNIRSRKVQLFKEQME 152

Query: 64  YMQKREIDLHNNNQLLRAKIAEN 86
            ++ +E  L   N  LR K AEN
Sbjct: 153 QLKAKERLLLEENIRLREKCAEN 175


>29907.m000663 mads box protein, putative
          Length = 205

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 48/84 (57%)

Query: 3   QQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEI 62
           +++ + L+ +I  LQK +R++LG     +   +L  LE  LE  I  IRS K E++  EI
Sbjct: 96  KEEISMLKQEIEILQKGLRHLLGGGAAEMTLDELLILEKNLEIWIYHIRSTKMEIMAKEI 155

Query: 63  EYMQKREIDLHNNNQLLRAKIAEN 86
           + ++ +E  L   NQ L+ KI EN
Sbjct: 156 QLLRNKEGILKAANQYLQDKIEEN 179