Jatropha Genome Database

JcCA0128511.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0128511.20 - phase: 0 /partial
         (232 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29660.m000782 palmitoyl-acyl carrier protein thioesterase             382   e-107
29848.m004677 palmitoyl-acyl carrier protein thioesterase             191   2e-49
30147.m014468 palmitoyl-acyl carrier protein thioesterase             184   4e-47
30217.m000262 Oleoyl-acyl carrier protein thioesterase, putative      162   1e-40
29841.m002744 Myristoyl-acyl carrier protein thioesterase, chlor...   140   4e-34

>29660.m000782 palmitoyl-acyl carrier protein thioesterase
          Length = 397

 Score =  382 bits (981), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/232 (79%), Positives = 205/232 (88%), Gaps = 9/232 (3%)

Query: 1   GEVVEIDTWVGASGKNGMRRDWLVRSQATGQVFARATSTWVMMNEKTRRLSKMPEEVRAE 60
           GEVVEIDTWV ASGKNGM+RDWL+RSQATG VF RATSTWVMMNEKTRRLSKMPEEVRAE
Sbjct: 173 GEVVEIDTWVRASGKNGMKRDWLIRSQATGHVFVRATSTWVMMNEKTRRLSKMPEEVRAE 232

Query: 61  IAPWFIEKQAIKEEVPEKIAKLDDKARYVVTNLKPKRSDLDMNQHVNNVKYVRWMLETLP 120
           I+PWFIEKQAIKEEVP+KIAKLDDKARYV++NLKPKRSDLDMN HVNNVKYVRWMLE LP
Sbjct: 233 ISPWFIEKQAIKEEVPDKIAKLDDKARYVISNLKPKRSDLDMNHHVNNVKYVRWMLEILP 292

Query: 121 DQFFENHQLSGITLEYKRECGSSDIVESLCEPDEEEGIINTGLKQNNDKSLFNGFSLPSE 180
           D F E+HQLSGIT+EY+RECGS+DIV+SLCEPD +E +       +ND  + NGFSL SE
Sbjct: 293 DHFLESHQLSGITMEYRRECGSADIVQSLCEPDGDEIL-------SNDIPVLNGFSLASE 345

Query: 181 -IMEGNGFLSSLEKTPLKYTHLLVAKGKTQSEEIVRGKTIWKKKLLTTMPFS 231
            +MEGNGFL  L+K PLKYTHLL+ KG++Q+EEIVRGKTIWKKK L TMPFS
Sbjct: 346 PLMEGNGFLVPLDKVPLKYTHLLLTKGESQNEEIVRGKTIWKKK-LCTMPFS 396


>29848.m004677 palmitoyl-acyl carrier protein thioesterase
          Length = 419

 Score =  191 bits (485), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 102/224 (45%), Positives = 131/224 (58%), Gaps = 34/224 (15%)

Query: 1   GEVVEIDTWVGASGKNGMRRDWLVRSQATGQVFARATSTWVMMNEKTRRLSKMPEEVRAE 60
           G+VV++DTWV  SGKNGMRRDW VR   TG+   RA+S WVMMN+ TRRLSK+PEEVR E
Sbjct: 213 GDVVQVDTWVSKSGKNGMRRDWCVRDSRTGETLTRASSVWVMMNKLTRRLSKIPEEVRGE 272

Query: 61  IAPWFIEKQAIKEEVPEKIAKLDDK-ARYVVTNLKPKRSDLDMNQHVNNVKYVRWMLETL 119
           I P+F+    I +E   K+ KLDD  A YV   L P+ SDLD+NQHVNNVKY+ W+LE+ 
Sbjct: 273 IEPYFLNSDPIVDEDSRKLPKLDDSNADYVRKGLTPRWSDLDINQHVNNVKYIGWILESA 332

Query: 120 PDQFFENHQLSGITLEYKRECGSSDIVESLCEPDEEEGIINTGLKQNNDKSLFNGFSLPS 179
           P    E+H+LS ITLEY+RECG   +++SL                              
Sbjct: 333 PLPILESHELSAITLEYRRECGRDSVLQSLTA---------------------------- 364

Query: 180 EIMEGNGFLSSLEKTPLKYTHLLVAKGKTQSEEIVRGKTIWKKK 223
             + GNG  +      ++  HLL  +      EIVRG+T W+ K
Sbjct: 365 --VSGNGIGNLGNAGDIECQHLLRLE---DGAEIVRGRTEWRPK 403


>30147.m014468 palmitoyl-acyl carrier protein thioesterase
          Length = 392

 Score =  184 bits (466), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 100/226 (44%), Positives = 138/226 (61%), Gaps = 34/226 (15%)

Query: 1   GEVVEIDTWVGASGKNGMRRDWLVRSQATGQVFARATSTWVMMNEKTRRLSKMPEEVRAE 60
           G+VVEIDTWV  +GKNGMRRDW++R   T ++  RATSTWV+MN +TR+LSKMPE+VR E
Sbjct: 192 GDVVEIDTWVDGAGKNGMRRDWIIRDYNTKEIITRATSTWVIMNRETRKLSKMPEQVRQE 251

Query: 61  IAPWFIEKQAIKEEVP--EKIAKL-DDKARYVVTNLKPKRSDLDMNQHVNNVKYVRWMLE 117
           + P++  + AI +E    EKI KL D+ A  + + L P+ SD+D NQHVNNVKY+ W+LE
Sbjct: 252 LVPFYTNRIAIAKENNDVEKIDKLTDETAERIRSGLAPRWSDMDANQHVNNVKYIGWILE 311

Query: 118 TLPDQFFENHQLSGITLEYKRECGSSDIVESLCEPDEEEGIINTGLKQNNDKSLFNGFSL 177
           ++P    E++ L+ +TLEY+REC  S+++ESL    E           NN+         
Sbjct: 312 SVPINVLEDYNLTSMTLEYRRECRQSNLLESLTSTTEHS---------NNN--------- 353

Query: 178 PSEIMEGNGFLSSLEKTPLKYTHLLVAKGKTQSEEIVRGKTIWKKK 223
                      S   K  L+YTHLL  + +    EIVR +T W+ K
Sbjct: 354 -----------SCNRKAHLEYTHLL--RMQADKAEIVRARTEWQSK 386


>30217.m000262 Oleoyl-acyl carrier protein thioesterase, putative
          Length = 371

 Score =  162 bits (410), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 134/230 (58%), Gaps = 26/230 (11%)

Query: 1   GEVVEIDTWVGASGKNGMRRDWLVRSQATGQVFARATSTWVMMNEKTRRLSKMPEEVRAE 60
            +VVE++TW  + G+ G RRDW++   ATGQ+  RATS WVMMN+ TRRL K+ ++VR E
Sbjct: 158 SDVVEVETWCQSEGRIGTRRDWILTDYATGQIIGRATSKWVMMNQDTRRLQKVTDDVREE 217

Query: 61  IAPWFIE--KQAIKEE---VPEKIAKLDDKARYVVTNLKPKRSDLDMNQHVNNVKYVRWM 115
              +     + A  EE     +KI+KL+D A+Y    L P+R+DLDMNQHVNNV Y+ W+
Sbjct: 218 YLVFCPRELRLAFPEENNRSSKKISKLEDPAQYSKLGLVPRRADLDMNQHVNNVTYIGWV 277

Query: 116 LETLPDQFFENHQLSGITLEYKRECGSSDIVESL--CEPDEEEGIINTGLKQNNDKSLFN 173
           LE++P +  + H+L  ITL+Y+REC   DIV+SL   EP E    + + L+  N      
Sbjct: 278 LESIPQEIIDTHELQTITLDYRRECQHDDIVDSLTSVEPSENLEAV-SELRGTN------ 330

Query: 174 GFSLPSEIMEGNGFLSSLEKTPLKYTHLLVAKGKTQSEEIVRGKTIWKKK 223
                     G+   ++ ++    + HLL   G     EI RG+T W+KK
Sbjct: 331 ----------GSATTTAGDEDCRNFLHLLRLSG--DGLEINRGRTEWRKK 368


>29841.m002744 Myristoyl-acyl carrier protein thioesterase,
           chloroplast precursor, putative
          Length = 363

 Score =  140 bits (354), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 121/223 (54%), Gaps = 39/223 (17%)

Query: 2   EVVEIDTWVGASGKNGMRRDWLVRSQATGQVFARATSTWVMMNEKTRRLSKMPEEVRAEI 61
           +VV++DTW+  SGKNG+ RDW+ R   TG+  A ATS  ++MN+KTR+LSK  +E++ E+
Sbjct: 172 DVVQVDTWMYQSGKNGLGRDWIFRDGRTGETVAHATSISLLMNKKTRKLSKFAKEIKEEL 231

Query: 62  APWFIEKQA-IKEEVPEKIAKLDDKARYVVTNLKPKRSDLDMNQHVNNVKYVRWMLETLP 120
            P  ++    I     +K+      A Y  T L+P  +DLD+NQHVN+ KY+ W+L+ +P
Sbjct: 232 VPHMMDCNPRINNHARKKLHFDVQTADYSCTGLRPGWNDLDLNQHVNHAKYINWILQNIP 291

Query: 121 DQFFENHQLSGITLEYKRECGSSDIVESLCEPDEEEGIINTGLKQNNDKSLFNGFSLPSE 180
             F E+H LS + LEY++EC +   ++SL +                         + SE
Sbjct: 292 RSFIEHHNLSTLALEYRKECNTDSTLQSLSKI------------------------VKSE 327

Query: 181 IMEGNGFLSSLEKTPLKYTHLLVAKGKTQSEEIVRGKTIWKKK 223
           I +            +++ HLL+ +      EIVRG TIWK +
Sbjct: 328 IHD-----------QVEFDHLLLLENGL---EIVRGSTIWKPR 356