Jatropha Genome Database

JcCA0128511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0128511.10 + phase: 0 /partial
         (156 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29660.m000781 phosphatidylserine synthase, putative                   281   7e-77

>29660.m000781 phosphatidylserine synthase, putative
          Length = 423

 Score =  281 bits (720), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 137/156 (87%), Positives = 143/156 (91%)

Query: 1   VKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLSLCIVFLTVELNTFFLKFCLWVPPRNPVI 60
           VKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLSLCIVFLTVELNTFFLKFCLW+PPRNPVI
Sbjct: 268 VKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLSLCIVFLTVELNTFFLKFCLWIPPRNPVI 327

Query: 61  VYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAXXXXXXXXXXKFGHGLYPNP 120
           +YRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLA          KFGHGLYP P
Sbjct: 328 IYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPKP 387

Query: 121 MPVWLVIFWASIGVALLTFLAIWSWQLHRRLGRKRQ 156
           MPVWLVIFWA++GVALL F+ IWSWQLH+RLGRKRQ
Sbjct: 388 MPVWLVIFWAAVGVALLLFIIIWSWQLHQRLGRKRQ 423