Jatropha Genome Database

JcCA0127661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0127661.10 - phase: 0 /pseudo
         (169 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29816.m000669 Nicotinate-nucleotide pyrophosphorylase [carboxyla...   248   1e-66
29816.m000668 Nicotinate-nucleotide pyrophosphorylase [carboxyla...   233   3e-62
34898.m000024 Nicotinate-nucleotide pyrophosphorylase [carboxyla...    69   9e-13

>29816.m000669 Nicotinate-nucleotide pyrophosphorylase
           [carboxylating], putative
          Length = 353

 Score =  248 bits (632), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 122/155 (78%), Positives = 130/155 (83%), Gaps = 1/155 (0%)

Query: 1   AMADAAHPACILETRKTAPGLRLVDKWAVLIGGGRNHRMGLFDMVMIKDNHISIAGGIIN 60
           AMADAA PACILETRKTAPGLRLVDKWAVLIGGG+NHRMGLFDMVMIKDNHISIAGGIIN
Sbjct: 162 AMADAASPACILETRKTAPGLRLVDKWAVLIGGGKNHRMGLFDMVMIKDNHISIAGGIIN 221

Query: 61  AIKAVDQYLEQRNLQMXXXXXXXXXXXXXXXXDYTSQTKTSLTRIMLDNMVIPLPNGDVD 120
           AI++VDQYLEQ+NLQM                 YTSQT+TS+TRIMLDNMVIPLPNGDVD
Sbjct: 222 AIRSVDQYLEQKNLQMEVEVETRTLEEVNEVLHYTSQTRTSVTRIMLDNMVIPLPNGDVD 281

Query: 121 VSMLKQAVELINGRFETEASGKCXLLKQXHKIGQT 155
           V+MLK AVELINGRFETEASG    L+  HKIGQT
Sbjct: 282 VTMLKNAVELINGRFETEASGNV-TLETVHKIGQT 315


>29816.m000668 Nicotinate-nucleotide pyrophosphorylase
           [carboxylating], putative
          Length = 314

 Score =  233 bits (594), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 114/154 (74%), Positives = 122/154 (79%), Gaps = 1/154 (0%)

Query: 2   MADAAHPACILETRKTAPGLRLVDKWAVLIGGGRNHRMGLFDMVMIKDNHISIAGGIINA 61
           MADAA PACILETRKTAPGLRL+DKWAVLIGGG+NHRMGLFDMVM+KDNHISIAGGI NA
Sbjct: 124 MADAASPACILETRKTAPGLRLIDKWAVLIGGGKNHRMGLFDMVMVKDNHISIAGGIANA 183

Query: 62  IKAVDQYLEQRNLQMXXXXXXXXXXXXXXXXDYTSQTKTSLTRIMLDNMVIPLPNGDVDV 121
           I++VD YLE+ NLQM                 Y SQ KTSLTRIMLDNMV+PLPNGDVDV
Sbjct: 184 IRSVDDYLERNNLQMEVEIETRTLEEVNEVLSYASQKKTSLTRIMLDNMVVPLPNGDVDV 243

Query: 122 SMLKQAVELINGRFETEASGKCXLLKQXHKIGQT 155
           SMLK A ELINGRFETEASG    L   H+IGQT
Sbjct: 244 SMLKSAAELINGRFETEASGNV-TLDTVHRIGQT 276


>34898.m000024 Nicotinate-nucleotide pyrophosphorylase
           [carboxylating], putative
          Length = 191

 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 43/63 (68%)

Query: 1   AMADAAHPACILETRKTAPGLRLVDKWAVLIGGGRNHRMGLFDMVMIKDNHISIAGGIIN 60
           A A A   A +  TRKT PGLR ++K+AV  GGG NHR  L D ++IKDNHI+IAGG   
Sbjct: 123 ARAIAGTRASVACTRKTTPGLRALEKYAVRAGGGMNHRFALHDAILIKDNHIAIAGGTRE 182

Query: 61  AIK 63
           A++
Sbjct: 183 ALR 185