Jatropha Genome Database

JcCA0127101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0127101.10 - phase: 1 /partial
         (207 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013659 conserved hypothetical protein                          366   e-102
30099.m001643 conserved hypothetical protein                          333   3e-92
29825.m000325 conserved hypothetical protein                          330   4e-91

>30170.m013659 conserved hypothetical protein
          Length = 256

 Score =  366 bits (940), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 172/207 (83%), Positives = 190/207 (91%)

Query: 1   GFGSNKGVVSTIEGDFSCTVEVQRAIPILKKAYGDHMRKVLHVGPDTCSVVSLLLKEEET 60
           G+G   G  S IEGDFSCTVEVQRAIP+LKKAYGD M KVLHVGPDTCSV+S L KEEET
Sbjct: 50  GYGGKIGAFSRIEGDFSCTVEVQRAIPVLKKAYGDSMHKVLHVGPDTCSVISQLRKEEET 109

Query: 61  EAWGVEPYDIEDVDSHCRALVQKGNVRVADIKFPLPYRPKSFSLVIVSDALDYLSPRYLN 120
           EAWGVEPYDIEDVDSHCRALV+KG +RVADIKFPLPYR KSFSLVIVSDALDYL+PRYLN
Sbjct: 110 EAWGVEPYDIEDVDSHCRALVRKGIIRVADIKFPLPYRQKSFSLVIVSDALDYLTPRYLN 169

Query: 121 RTLPELARVSSEGLIIFTGFPGQHRSKVAEVSKFGKAAKLRSLSWWTRYFIQTSLDENEA 180
           +TLP+LARVS+EGL+IFTGFPGQ+R+K AE+SKFG+AAKLRS SWW RYFIQTSL+ENEA
Sbjct: 170 KTLPDLARVSTEGLVIFTGFPGQNRAKGAELSKFGRAAKLRSSSWWARYFIQTSLEENEA 229

Query: 181 AVKKFDQAAAKKSYSPGCQIFHLKAYS 207
           A KKF+QAAAK SY+PGCQIFHLKAY+
Sbjct: 230 AFKKFEQAAAKNSYNPGCQIFHLKAYN 256


>30099.m001643 conserved hypothetical protein
          Length = 261

 Score =  333 bits (854), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 155/206 (75%), Positives = 183/206 (88%)

Query: 1   GFGSNKGVVSTIEGDFSCTVEVQRAIPILKKAYGDHMRKVLHVGPDTCSVVSLLLKEEET 60
           G  S +   S IEG  SCT+EVQRAIP+LKKAYGD M KVLH+GPDTCSVVS LLKEEET
Sbjct: 55  GHISEREAFSKIEGGGSCTLEVQRAIPLLKKAYGDSMHKVLHLGPDTCSVVSKLLKEEET 114

Query: 61  EAWGVEPYDIEDVDSHCRALVQKGNVRVADIKFPLPYRPKSFSLVIVSDALDYLSPRYLN 120
           EAWGVEPYD++DVD+ C++LV+KG VRVADIKFPLPYR KSFSLVIVSDALDYLSPRYLN
Sbjct: 115 EAWGVEPYDLDDVDASCKSLVRKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPRYLN 174

Query: 121 RTLPELARVSSEGLIIFTGFPGQHRSKVAEVSKFGKAAKLRSLSWWTRYFIQTSLDENEA 180
           +TLPELARVS++G+IIF+G+PGQH++KVAE+SKFG+ AK RS +WW RYF+Q SL+ENEA
Sbjct: 175 KTLPELARVSADGVIIFSGYPGQHKAKVAELSKFGRPAKFRSSTWWIRYFLQNSLEENEA 234

Query: 181 AVKKFDQAAAKKSYSPGCQIFHLKAY 206
           A KKF+QA+ K+SY PGCQ+FHLK+Y
Sbjct: 235 ASKKFEQASVKRSYKPGCQVFHLKSY 260


>29825.m000325 conserved hypothetical protein
          Length = 248

 Score =  330 bits (845), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 149/193 (77%), Positives = 175/193 (90%)

Query: 14  GDFSCTVEVQRAIPILKKAYGDHMRKVLHVGPDTCSVVSLLLKEEETEAWGVEPYDIEDV 73
           GDFSCT+EVQR IP+LKKAYGD MRKVLHVGPDTCSVVS LLKEEETEAWGVEPYDIED 
Sbjct: 55  GDFSCTLEVQRTIPLLKKAYGDSMRKVLHVGPDTCSVVSQLLKEEETEAWGVEPYDIEDA 114

Query: 74  DSHCRALVQKGNVRVADIKFPLPYRPKSFSLVIVSDALDYLSPRYLNRTLPELARVSSEG 133
           D++C+  ++KG VRVADIKFPLPYR KSFSLVIVSDALDYLSP+YLNRTLPELARV+++G
Sbjct: 115 DANCKNSIRKGIVRVADIKFPLPYRTKSFSLVIVSDALDYLSPKYLNRTLPELARVAADG 174

Query: 134 LIIFTGFPGQHRSKVAEVSKFGKAAKLRSLSWWTRYFIQTSLDENEAAVKKFDQAAAKKS 193
           L+I+ G+PGQ R+KVAE+SKFG+ AK+RS SWW R+F+QTS++ENE A+KKF+QA +KKS
Sbjct: 175 LVIYAGYPGQQRAKVAELSKFGRPAKMRSSSWWVRFFVQTSIEENETAMKKFEQAISKKS 234

Query: 194 YSPGCQIFHLKAY 206
           Y P CQ+FHLK Y
Sbjct: 235 YKPTCQVFHLKPY 247