Jatropha Genome Database

JcCA0126401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0126401.10 + phase: 0 /pseudo
         (286 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29706.m001323 protein phosphatase 2c, putative                        333   4e-92
29739.m003582 protein phosphatase 2c, putative                        166   8e-42
29912.m005309 protein phosphatase 2c, putative                        136   1e-32
29912.m005442 protein phosphatase 2c, putative                         61   7e-10
29751.m001870 protein phosphatase 2c, putative                         51   6e-07

>29706.m001323 protein phosphatase 2c, putative
          Length = 536

 Score =  333 bits (855), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 180/285 (63%), Positives = 209/285 (73%), Gaps = 24/285 (8%)

Query: 1   MSPAVAMTLSLGNSICDNSGIATHVEITRLKLVTDAVSLLSDPAKVVSDEAVAVCSGSSD 60
           MSPAVAMTLS GNS+C+NSGIATHVEITRLKLVTD VSLLSDP  VV +           
Sbjct: 4   MSPAVAMTLSFGNSMCENSGIATHVEITRLKLVTDTVSLLSDPVNVVEE---------GH 54

Query: 61  DAKNGMEFTTLSESKDGGVG-----------GNDSVPTDAMIQXXXXXXXXXXXXXTNGT 109
              +G    + S+++D G+G           GN S+PTDA+IQ             TNG 
Sbjct: 55  SVCSGSCSGSCSDARDDGLGLTGSLKILPENGNISIPTDAVIQESDEDEVLSVTEDTNGI 114

Query: 110 ISXXXXXXXXGSEINLPKSVEIEDMIEDSQIIAKAIIVESSNEVQVPTAKLLIAAVSPNA 169
           I+        GSEI+L KSVEI+D     Q+IAKAIIVESSNEVQVP AKLLIAAVSP+A
Sbjct: 115 ITGELLALEAGSEISLAKSVEIDD----CQLIAKAIIVESSNEVQVPMAKLLIAAVSPSA 170

Query: 170 DITDGSELRASAVVLKLPSESNLSKGTSRSVFEIDCVPLWGSVSICGRRPEMEDSLAAVP 229
            I+D S+LRASAVVLKLP+E  LSKG +RSVFE+DCVPLWGSVS+CGRRPEMED++AAVP
Sbjct: 171 GISDSSDLRASAVVLKLPNEKILSKGAARSVFELDCVPLWGSVSVCGRRPEMEDAVAAVP 230

Query: 230 RFAKIPIKMLIGDHVVNGLNESLTHLTSHFFGVYDGHGGAQVHLY 274
           RF K+PIKMLIGD VV+G++E+LTHLTSHFFGVYDGHGG QV  Y
Sbjct: 231 RFTKVPIKMLIGDRVVDGISENLTHLTSHFFGVYDGHGGVQVANY 275


>29739.m003582 protein phosphatase 2c, putative
          Length = 550

 Score =  166 bits (421), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/298 (39%), Positives = 151/298 (50%), Gaps = 30/298 (10%)

Query: 5   VAMTLSLGNSICDNSGIATHVEITRLKLVTD-AVSLLSDPAKVVSDEAVAVCSGSSDDAK 63
           VA+   +GNSIC+N  I TH+EITRLK + D A  LLSD    +S      C+ S  D  
Sbjct: 8   VAVPFRVGNSICENPTIDTHLEITRLKFMADTAAGLLSDSVTKISTAGDKDCNCS--DLG 65

Query: 64  NGMEFTTLSESK-DGGVGG------------NDSVPTDAMIQXXX--------------X 96
           + +  TT++  K D G GG            N  V  D + Q                  
Sbjct: 66  DEVSDTTVAVPKEDKGEGGAPLLDMVSENKSNWVVNHDVINQESDEEDSFSLEGDPIFDS 125

Query: 97  XXXXXXXXXTNGTISXXXXXXXXGSEINLPKSVEIEDMIEDSQIIAKAIIVESSNEVQVP 156
                    T+             SEI  P  +++E  I +  IIA A+    SN     
Sbjct: 126 SCSLSVASETSSLCGEDFLGFDATSEIRPPGYLDVEKSICNVDIIANAVDSVESNVEAKV 185

Query: 157 TAKLLIAAVSPNADITDGSELRASAVVLKLPSESNLSKGTSRSVFEIDCVPLWGSVSICG 216
            +  +  AVS   +I DGS  + S VVL+L  E   S    RSVFE+DCVPLWG  SICG
Sbjct: 186 VSDSVAVAVSLEEEIGDGSNPKTSTVVLQLALEKGASGTVPRSVFEVDCVPLWGFTSICG 245

Query: 217 RRPEMEDSLAAVPRFAKIPIKMLIGDHVVNGLNESLTHLTSHFFGVYDGHGGAQVHLY 274
           RRPEMED+ A VP F KIPI+MLIGD V++G+ + +T  ++HFF VYDGHGG+QV  Y
Sbjct: 246 RRPEMEDAFATVPHFLKIPIQMLIGDRVLDGVGKYITQQSAHFFAVYDGHGGSQVANY 303


>29912.m005309 protein phosphatase 2c, putative
          Length = 537

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 144/280 (51%), Gaps = 11/280 (3%)

Query: 1   MSPAVAMTLSLGNSICDNSGIATHVEITRLKLVTDAVSLLSDPAKVVSDEAVAV-CSG-- 57
           +SPAVA+  S+   +C+ S +  H+EI  LK + D  +L+S+P +  +    +V C    
Sbjct: 4   LSPAVAVPFSIDKMMCNKSPVTAHMEIAGLKRMADKANLISNPTRKPNMPFESVTCKNEG 63

Query: 58  -SSDDAKNGMEFTTLSESKDGGVGGNDSVPTDAMI--QXXXXXXXXXXXXXTNGTISXXX 114
            SS+ AK+G+    ++         N     D +I                 N T S   
Sbjct: 64  YSSNSAKSGINQVLVAADLSARETINVRFEDDELILLGDDQSLENICSQSMANDTSSICC 123

Query: 115 XXXXXGSEINLPKSVEIEDMIEDSQIIAKAIIVESSNEVQVPTAKLLIAAVSPNADITDG 174
                 +  ++  S+++E    + ++I K+ + E + E++      +   VS  AD  D 
Sbjct: 124 EELLALNANSIRNSLDVEISDGNFEMIPKSYLREPNVELES-----MDGIVSVAADTEDK 178

Query: 175 SELRASAVVLKLPSESNLSKGTSRSVFEIDCVPLWGSVSICGRRPEMEDSLAAVPRFAKI 234
           +   +   +  +P      K  + SVFE D +PLWG  S+CGRRPEMED+ AA+P++ +I
Sbjct: 179 NGYSSDPKLCTVPPGMLKEKRINISVFESDNIPLWGFTSVCGRRPEMEDAFAAMPQYLQI 238

Query: 235 PIKMLIGDHVVNGLNESLTHLTSHFFGVYDGHGGAQVHLY 274
           P +ML+ DHV+NG+N+     T+HFFGVYDGHGG+QV  Y
Sbjct: 239 PAQMLMDDHVLNGMNQKAGCFTAHFFGVYDGHGGSQVANY 278


>29912.m005442 protein phosphatase 2c, putative
          Length = 399

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 209 WGSVSICGRRPEMEDSLAAVPRFAKIPIKMLIGDHVVNGLNESLTHLTSHFFGVYDGHGG 268
           WG  S+ GRR EMEDS+A +P F        +G  +  G   S      HFFGVYDGHGG
Sbjct: 107 WGFTSVIGRRGEMEDSVAVIPGFVSRTC-YHVGGCIAPGSRTSAEISPIHFFGVYDGHGG 165

Query: 269 AQVHLY 274
           +QV  Y
Sbjct: 166 SQVANY 171


>29751.m001870 protein phosphatase 2c, putative
          Length = 393

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 15/72 (20%)

Query: 200 VFEIDCVPLWGSVSICGRRPEMEDSLAAVPRFAKIPIKMLIGDHVVNGLNESLTHLTSHF 259
           V + D  P +G  S+CGRR +MED++A  P F                  E  T L  H+
Sbjct: 140 VIDADLYPKYGVASVCGRRRDMEDAVATYPFF-------------FQKDEEFDTQL--HY 184

Query: 260 FGVYDGHGGAQV 271
           FGVYDGHG + V
Sbjct: 185 FGVYDGHGCSHV 196