Jatropha Genome Database

JcCA0124371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0124371.10 - phase: 0 
         (95 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27383.m000156 triosephosphate isomerase, putative                     134   1e-32
32915.m000014 triosephosphate isomerase, putative                     122   4e-29
29711.m000323 triosephosphate isomerase, putative                      94   1e-20

>27383.m000156 triosephosphate isomerase, putative
          Length = 254

 Score =  134 bits (336), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 66/69 (95%)

Query: 26  VHFELRKWLKENTSPEVAETTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLKPEFIEI 85
           VHFELRKWLKENTS +VA TTRIIYGGSVTA NCKELAAQPDVDGFLVGGASLKPEFIEI
Sbjct: 185 VHFELRKWLKENTSSQVAATTRIIYGGSVTATNCKELAAQPDVDGFLVGGASLKPEFIEI 244

Query: 86  IKSAEVKKS 94
           IKSAEVKKS
Sbjct: 245 IKSAEVKKS 253


>32915.m000014 triosephosphate isomerase, putative
          Length = 70

 Score =  122 bits (306), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 61/70 (87%)

Query: 26 VHFELRKWLKENTSPEVAETTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLKPEFIEI 85
          VHFELRKWL +N S EVA +TRIIYGGSV  ANCKELA QPD+DGFLVGGASLKPEF+ I
Sbjct: 1  VHFELRKWLHDNVSSEVAASTRIIYGGSVNGANCKELAGQPDLDGFLVGGASLKPEFVNI 60

Query: 86 IKSAEVKKSA 95
          IKSA VKKSA
Sbjct: 61 IKSAAVKKSA 70


>29711.m000323 triosephosphate isomerase, putative
          Length = 313

 Score = 94.0 bits (232), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 50/71 (70%), Gaps = 1/71 (1%)

Query: 26  VHFELRKWLKENTSPEVAETTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLK-PEFIE 84
           VH  LR WLK+N S EVA  TRIIYGGSV   NC ELA Q D+DGFLVGGASLK PEF  
Sbjct: 242 VHVALRDWLKKNISEEVASKTRIIYGGSVNGGNCAELAKQEDIDGFLVGGASLKGPEFAT 301

Query: 85  IIKSAEVKKSA 95
           II S   KK A
Sbjct: 302 IINSVTSKKVA 312