Jatropha Genome Database

JcCA0123391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0123391.10 + phase: 0 /pseudo/partial
         (113 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008994 phosphomannomutase, putative                            186   2e-48

>30174.m008994 phosphomannomutase, putative
          Length = 244

 Score =  186 bits (473), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 94/121 (77%), Positives = 100/121 (82%), Gaps = 9/121 (7%)

Query: 1   MINVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFSHLNLTFSIGGQISFDT--- 57
           MINVSPIGRNCSQEERD+FEKYDKVHNIRPKMVSVLREKF+HLNLTFSIGGQISFD    
Sbjct: 123 MINVSPIGRNCSQEERDDFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPE 182

Query: 58  A*DTSMSLMKSTS------FGDKTYKGGNDYEIYESDRTVGHTVTSPDDTVVQCKALFLA 111
             D +  L           FGDKTYKGGND+EIYES+RTVGHTVTSPDDT+ QCKALFLA
Sbjct: 183 GWDKTYCLRYLEEFNEIHFFGDKTYKGGNDHEIYESERTVGHTVTSPDDTMEQCKALFLA 242

Query: 112 N 112
           N
Sbjct: 243 N 243